Coccomyxa subellipsoidea: COCSUDRAFT_55172 Help Entry COCSUDRAFT_55172  CDS       T02914                                  Name (RefSeq) hypothetical protein   KO K03128   transcription initiation factor TFIID subunit 2 Organism csl  Coccomyxa subellipsoidea Pathway csl03022   Basal transcription factors Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     COCSUDRAFT_55172  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:csl01002]     COCSUDRAFT_55172   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csl03021]     COCSUDRAFT_55172    03036 Chromosome and associated proteins [BR:csl03036]     COCSUDRAFT_55172 Peptidases and inhibitors [BR:csl01002]  Metallo peptidases   Family M1    COCSUDRAFT_55172 Transcription machinery [BR:csl03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIID      COCSUDRAFT_55172    Coactivators     SAGA/TFTC/STAGA complex      COCSUDRAFT_55172 Chromosome and associated proteins [BR:csl03036]  Eukaryotic type   Histone modification proteins    HAT complexes     TFTC complex      COCSUDRAFT_55172 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_M1 Peptidase_M1_N DUF6312 Motif Other DBs NCBI-GeneID:  17045163 NCBI-ProteinID:  XP_005651692 JGI:  55172 UniProt:  I0Z929 LinkDB All DBs AA seq 1510 aa AA seqDB search MEDAAATVADHAFFQYERTLQRESNPELIITLPPAQSTPALPPAGTPPPAPAGNTAADGA EQPNDAISQQGGDKGNVEQKENGALAGHEAGDGLRTVVLRVEYELNDPGSGLLFWGAYVH TNNQVRRARAWLPCVDTPNGACPFDMRVTVGAHETAVASGELTKQTWASQNRRTFHFAIR HPTPPRHLALAVGPFAVLPGQTRAGAGSPQQEEAGQPTAAPTVITHFAPEKLRLQLEHAT KIFPLAFNLFEDFLGAQFPLRSCHQVFVPGEGCSEEVMASAGMCIASADLLFSESTVEQA VESWLVLVRALARQWFGVWIRPKIPADEWLLEGLAGFLENLFLAKYLGRNELLYRRHKER EAIFLADDGNAPPLYVKGPPGFPWGALHATESLGPGAALRRWKASAVIQMLEQRAGEDNF KRLLSRIVRASCQPATAQGANPRLLGTHEFLNQIVKAGGKESKHEISAFHQRWIIGRGCP LLTAAVVFHRKRSTLELAIRQTGPQAARAAAEKVAAKEGSSAGFIKVLVRETEAPVEHPV NLGTAALRLVELKVTSKPAKPKPGKPGRKKKLQVVHEDLDDDGDATMADAPDVAGEASRL PVEWVRLDPHGESLAAVRLAQPEVMASAQLERSKDVAAQSAAIAQLAALRPTSYGVVNAL RACMQHAATYCRIRVEAALALGATAGPSTAWSGLEHLLKYYRTRIFDSDIGLPRPWQFTD LSQHYVDQALPHAIAAVRDAAGHSFPEAAEALLEHLDHADNSGNAYSDDNALAALLDALG SLHLQSPDAMAGILDRLERYLQREAVMPSFHSIVGCTALTSLTSLAVSMRSPPKQKARLR LFLQRYSRPDAPHHLRLTAAQCSVRIAACTDGADGAVQAALAALAAEKSPALRGAILESL LGLLHRPAAAAARSGGPAKSGTAAKTKIVSMAVLAQLHALLSAHGDVGLRHLAFMALMRL GGLAPTLFREEEKFAVAGPAMSMEVGTQRVMPTASGPAISFDSGGRRPPVLKLRSSFLAP TPETAKRGASEFSGEGSRERTQQQPTRSSARQRSEQPIVDLTEVSNRTATGAPSATAGAA PAAAAASDQEAVSPAVTPQAASKPLKVKFSFGTSSRLARPPAAEPAAAAPVPPPADNGSG KRKLDGAASGDGAGAGSPLEPAPAKRQKRKEAALADLAAAAPAARMQPAPRAATPPAERR DVLAAFAPERPIARLPSPFAGPAVQQPPQPLPQPKKTSKAAKKGRTTPPAVDSAARDAML RDVMEIARRSPTPPALQRPRQTTPQPQSQRQPTPQRQPTPQPAPQGQPAPQRQPTPVPMP AEGAAQAVSRQPTPPVSRKTPDAAPKQRAQAQPSKREKLAAAPRQPVQQPASAATPVHAP ADPAIKPKFKFKFSGTAAALPAQPPPAMPPQQQRPSVAQRDSSGHQSFKAASAPAAEGPP KAKIGLKVKWSGLKAAAGPEPAKGAPGHTAGAASAPTAVQGRGTGKRDTEEKKQRKKQAR LLKEKRSLGL NT seq 4533 nt NT seq  +upstreamnt  +downstreamnt atggaggacgccgcagccacggtggcggaccacgccttcttccaatatgagcgcacactg cagcgcgagtcaaaccccgagctcataatcacccttccaccggcgcaatccacccctgcc ctgccgccagctggcacaccgccacctgcacccgcagggaacactgcagcagacggggct gagcagcccaatgacgcaattagtcagcagggtggagacaaggggaatgtggagcagaag gagaatggagcattggcgggacatgaggccggggatggcctgcgtactgttgtactgcgt gtggagtatgagctaaatgaccctggctctgggctgctcttctggggcgcctacgtgcac accaacaaccaggtgcggcgtgcgagggcgtggttgccctgtgtggatacccccaacgga gcgtgcccctttgacatgcgcgtcaccgttggggcgcatgagacggcggtggcgtcgggg gagctaacaaaacagacgtgggcgagccagaaccggcgcaccttccacttcgccatcagg caccccacgcctccccggcacctggcactggccgtggggcctttcgcggtgctgcccggg cagaccagggcaggggcgggcagcccgcagcaggaggaggcagggcagcccacagcagcg ccaactgtcatcacccattttgcgccggagaagctgcggcttcagctggagcacgccacc aaaatattcccgctggcgttcaacctctttgaggactttctgggcgcccaatttcccctg cgatcctgccatcaggtgtttgtgcctggggagggctgtagcgaggaggtcatggcaagt gctggcatgtgcatcgcctccgcagacctgctcttctcagagagcaccgtcgagcaggcg gtagagtcctggctggtgctggtgcgcgcgctggcgaggcagtggtttggggtgtggatc cgccccaagatcccagcggacgagtggctgctggagggcctggctggcttcctggaaaat ctcttccttgccaagtatctcggccgcaacgagctgctctaccggcggcacaaggagagg gaggcgatcttcctggcggacgacggcaacgcgccgccgctgtatgtcaagggccccccc gggttcccctggggcgcgctgcatgcaactgagagcctcggccccggcgctgcgctgcgg cgctggaaggcatcggcggtgatccagatgttggagcagcgagcgggggaggacaatttt aagcgcctgctcagccgaattgtcagggcctcctgccagcctgccactgcccagggtgcc aatccacggctactgggcacgcacgagttcctgaaccagatagtcaaggcgggcggcaaa gagagcaagcacgagatctcggccttccaccagcgctggatcatcggccgcggctgcccg ctgctcacagccgccgtcgtcttccacaggaagcggagcacgctggaacttgccatcagg cagacagggccgcaggcagccagggctgccgccgagaaggtggctgccaaagaaggctcc tctgctggctttattaaggtgttggtgagggagacagaggcaccggtggagcatccagtc aaccttggcacagcagcgctgaggctggtggagctgaaggtgaccagcaagcccgccaag cccaagcccggcaagcccgggcgtaagaagaagctccaagttgtccatgaagacctggac gatgacggcgatgcaaccatggccgacgcgcccgacgtcgcaggcgaggcgagccggctg ccagtggagtgggtgcgactggacccgcacggcgagtcactagccgccgtgcgcctggcg caaccggaggtgatggcgtccgcgcagctggagcgctccaaggatgtggccgcgcagtca gcggccattgcccagctggcagcgctgcggccgacctcctacggcgtcgtcaacgcgctg cgcgcatgcatgcagcacgccgccacctattgccggatccgcgtggaggccgcccttgcg ctgggagccacggcggggccctccacagcctggagcggccttgagcacctgctcaagtac taccgcacgcgcatctttgactctgatatcggcctgccacgcccctggcagttcacagac ctctcacaacactacgtggaccaggcgctgccgcacgcgatagcagcggtgagggacgcg gccgggcacagcttcccggaagctgccgaggcgctgctggagcacctggaccacgcggac aattcaggcaacgcctacagcgatgacaacgccctcgcagccctgctcgacgccctcggc agcctgcacctgcaatcccccgatgccatggcgggcattttggatcggctggagcgctat ctgcagcgagaggcggtcatgccgtccttccacagcatagtcggctgcacagcgctcacc tccctcactagcctggccgtcagcatgcgcagcccccccaaacagaaggccaggctgagg ctcttcttgcagcgatacagccggccagatgcgccgcaccatctgcggctgacggctgcg cagtgctctgtgcggatcgcggcctgcactgacggcgccgatggcgcggtgcaggctgct ctggcggccctggctgccgagaaatcccctgctctcaggggagcaattttggagtcgttg ctggggctactgcacaggccggcggcggctgcagccagatcaggcggccctgcaaagtcc ggcacagctgcaaagacaaagatcgtttcgatggctgtgctggctcagctgcatgcgctg ctgtctgcgcacggcgatgtcggcctgcgccacctggcattcatggcgttgatgcgcctc ggcgggctggcgcccacactcttccgagaagaggaaaaattcgccgtcgccgggccggcg atgagcatggaggtgggcacgcaaagggtcatgccgacggcctccggcccggccatctca ttcgacagcggcggccgccggccgcctgtgctgaagctgcgctccagcttcctcgcgccc accccggagaccgccaagcgcggcgcatcagagttctctggcgaggggagcagagagaga acccagcagcagcccacaaggagcagtgcgcgacagcgcagtgagcagccaattgtggac ttgacagaagtctcaaaccggactgccactggcgcgccttcggccacggctggggcagca ccagccgcggcagctgccagtgatcaagaagccgtctcgccggcggtcacgccgcaggcg gcgtccaagccgctgaaggtgaagttctcctttggaaccagctcgcggctcgcgcggccc cctgccgccgagccagcagcggccgccccggtgccgccgccagctgacaacggctccggc aagcgcaagctggacggcgcagccagcggcgatggcgccggcgcaggttctcctttggaa cctgcgccggccaagcggcagaagaggaaagaagcggcgctggcggatctcgccgcggcc gcacccgctgcgcgcatgcaacccgcaccgcgagccgcgacgcctccggccgagcgccgg gacgtccttgccgcctttgctcccgagcgaccgatcgcccggctgccgtcgccgtttgcc gggcctgccgtgcagcagccgccgcagccgctgccgcagccaaagaagacgagcaaggcg gcgaagaagggccgcacgacgccgccggcggtggacagcgcagcccgcgacgcgatgctg cgggatgtgatggagattgcccgccgctctcccacgccaccggcgctgcagcggcctcgg cagacgacgccacagccgcagtcgcagcgccagccaactccacagcgacagccgacgccg cagccggcaccacagggccagccagctccgcagcggcagccgacgccggtgccgatgccg gcagagggcgcggcgcaggccgtcagccggcagccgaccccgccggtgtcccggaagacg ccagacgctgcgccgaagcagagagctcaggcgcagccgagcaagcgtgagaagcttgcg gctgcgccaaggcagcctgtgcagcagccggccagtgctgcgacccctgtgcacgctcca gcagatcctgccataaagccaaagtttaaattcaaattcagcggaacggctgcggcgctg ccggcccagccgccgcctgccatgccaccgcagcagcagcggcccagcgttgctcaaaga gatagcagcggacatcagtctttcaaggctgcgtcggctcctgctgctgagggcccgccc aaagcaaagataggcctgaaggtcaagtggtccggcttgaaggcggcggctgggccagag cctgcaaagggcgctcctggtcatacagctggcgctgcctcagctcccactgcagtgcaa gggagagggaccggcaagcgagacactgaggagaagaaacagagaaagaagcaagcgcga ctgctgaaagagaagcgcagtctcggcctatga

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