Coccomyxa subellipsoidea: COCSUDRAFT_55793
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Entry
COCSUDRAFT_55793 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csl01009
]
COCSUDRAFT_55793
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_55793
Enzymes [BR:
csl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
COCSUDRAFT_55793
Protein phosphatases and associated proteins [BR:
csl01009
]
HAD phosphatases
Fcp/Scp phosphatases
COCSUDRAFT_55793
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
COCSUDRAFT_55793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
17045828
NCBI-ProteinID:
XP_005652357
JGI:
55793
UniProt:
I0ZAZ4
LinkDB
All DBs
AA seq
575 aa
AA seq
DB search
MTQPLTQVAEERALGKMCGHGACDRPLDAPKPKGTFKLDSKRQRVSACELAAHRLAARLG
PPEAALERFGVTQATLSGTGILRATASDPDQAESMYAAGSDDNPIMLSQVRERDPAELAA
QADRDAELALQTLAALHAGANPSAVEGYVPRGKSVPSHHIPTVIPPTPAAAAAASSAAPS
MPVISEEPLEHAGTNGRTAAASAPANGRSMAAQQSDAASEPAEKSASAAAGTASAADGGC
SSRDIQAGSGSDRSGSIGASESGGTVPERETAVDSAAAESESADVSALDSLPEDAAAASL
PQQPVLVFEVEDADGPLEGAAQENIAARFGRLKVADAGSAQQALAAEPTGVEADLNLWRQ
HLGIAAAEGSIAGGSAMLHPPTAPVGASITAAAEPDSKANVEDGVDTNDPEAEGDFLSQF
GRLFTTLDGWVTDATLRFVRCPPGRSPGQPEDTPPPEFAQGRAVLEGVLAREVPGVLGAL
HVPSLRSAVEVALRQLVATFYLRSAVPSLKEREWRLLMLALLRALSIERLPALQARHPEQ
FDGRAGVRTLNDMLADAGSTIEEFDALLEVMLPAP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaccgctgacacaggttgcagaggagagggcgctcgggaaaatgtgcggccac
ggcgcatgcgatcggccgttggatgctcccaaaccaaagggcaccttcaagttggactcc
aagcgccagcgcgtctctgcctgtgagctggcagctcaccggcttgcggcgaggctgggg
ccgcccgaggctgcgctggagcggtttggagttacgcaggcaacgttgtcggggacaggc
attctcagggcaactgcatcagatcctgaccaggcggagtcgatgtatgcggccggcagc
gatgacaaccccatcatgctctcgcaagtcagggagagggatccggctgagctggcggcg
caggctgaccgggacgctgagctggcgctgcagaccctggccgctctgcacgctggcgcc
aacccctctgctgttgaggggtatgtgccgcgcggcaagagcgtcccttctcaccatatc
cccacagtaataccacccacccctgccgcagccgccgccgcctcctctgcagcgcccagc
atgcctgtgatcagtgaagagcctctcgagcatgctggcacgaatgggcgcactgcagca
gccagcgcgcctgcgaatggcaggtcaatggcagcacagcagagtgacgcagcttcggag
cctgcggagaaaagtgcgagcgcagcagccggcacagcaagtgcagcagatggtggttgt
agcagtagggacatccaggcaggcagcggaagcgataggtcagggagtattggcgcctct
gagtctgggggcactgtgccagagcgagagacagcagtggacagtgcagcagctgagagt
gagtcagcagatgtgtcagcactggattccctgcctgaggatgcagctgctgcgagcttg
ccccagcagccagtcctggtgtttgaggtggaggatgcggatgggccgctggagggagcg
gcgcaggaaaacatcgcggcgcgttttgggcggctcaaagtggccgacgcgggcagcgca
cagcaggcgctcgcggcggagcccacaggtgtcgaggcggatctgaatttgtggcggcag
cacctcggcatcgccgctgcagaaggttcgatcgctggcggcagcgcaatgctgcacccg
cccacagcgcccgtcggagcaagcatcaccgcggcagcagagccggacagcaaagctaat
gtggaggacggtgtagatacaaatgaccccgaggcagaaggggactttctgtcgcagttc
ggccgccttttcacgacgctggacgggtgggtgactgatgccacgctgcgctttgtgcgc
tgcccaccgggcaggagtcccgggcagcccgaggacacacccccaccagagtttgcgcag
gggcgcgcagtgctggagggtgtgttggcgcgcgaagtgccgggtgtgctgggtgcgctg
cacgtgccatcgctgaggtcagcggtcgaggtggctctgcgtcagctcgtcgccacgttc
tacctgcgatccgctgttccctccctcaaggagcgcgagtggcggctgctgatgctggcg
ctgcttcgagcgttgtccatcgagcggctgccggcgctgcaggcaaggcatcctgagcaa
tttgacggccgcgccggcgtgcgcacgctgaatgacatgctggcagatgccgggagcaca
atcgaagaatttgatgcactgctggaagtgatgctgcctgccccataa
DBGET
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