Coccomyxa subellipsoidea: COCSUDRAFT_55868
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Entry
COCSUDRAFT_55868 CDS
T02914
Name
(RefSeq) DNA replication factor C complex subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03030
DNA replication
csl03410
Base excision repair
csl03420
Nucleotide excision repair
csl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCSUDRAFT_55868
03410 Base excision repair
COCSUDRAFT_55868
03420 Nucleotide excision repair
COCSUDRAFT_55868
03430 Mismatch repair
COCSUDRAFT_55868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csl03032
]
COCSUDRAFT_55868
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_55868
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_55868
DNA replication proteins [BR:
csl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
COCSUDRAFT_55868
DNA Replication Termination Factors
ELG1-RFC complex
COCSUDRAFT_55868
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
COCSUDRAFT_55868
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
COCSUDRAFT_55868
Check point factors
HRAD17(Rad24)-RFC complex
COCSUDRAFT_55868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Mg_chelatase
AAA_24
Viral_helicase1
nSTAND3
AAA_11
AAA_19
Rad17
AAA_5
DUF7745
AAA_30
AAA_25
RuvB_N
AAA_18
ABC_tran
RNA_helicase
RCF1-5-like_lid
bpMoxR
NTPase_1
AAA_28
MipZ
AAA_3
IstB_IS21
AAA_7
SRP54
KTI12
AAA_assoc_2
MeaB
MCM
Motif
Other DBs
NCBI-GeneID:
17040159
NCBI-ProteinID:
XP_005646717
JGI:
55868
UniProt:
I0YUV4
LinkDB
All DBs
AA seq
366 aa
AA seq
DB search
MGGEMEDAAEGMDIDMEPGPSAAEKGKAPATNDTDTSKKDSGIPWVEKFRPLYVKDIVGN
TDAVDRLQVISEEGNMPNIILAGPPGTGKTTSILCLARALLGQNYKEGVLELNASDDRGI
DVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQQALRRTMEIYSNTTRFALACNT
SSKIIEPIQSRCAIVRYTKLSDKEVLERLLVVCRSESVPYVDEGLGAVIFTADGDMRQAL
NNLQATYYGFGMITPEHVFKVCDQPHPLLISEIVKNCTAANIDGAYDGMKKICDMGYSSM
DIIQTLFRVVKNDPKLPEFLKLEFIREVGFCHMRIEDGVNSRLQLSGLLAKLCTKQLMAQ
WRLALE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggggggagagatggaggatgcggcagagggaatggacatagacatggagcctggccca
agtgcagctgagaagggcaaagcaccagcaaccaacgacactgatacctccaaaaaggat
agcgggattccttgggtggaaaagttcaggccgctgtatgtgaaggacattgtgggcaac
acagacgcagtggaccgccttcaggtcatttcggaagagggcaacatgcccaacataatc
ctggcgggcccgcctggtactggaaagaccaccagcattctgtgcctcgcgcgggcgctg
ctggggcagaactacaaggagggtgtgctggagctgaatgcctcagacgacagggggatt
gacgtggtgcgcaacaagataaagatgtttgcgcagaagaaggtgacgctgccgcccggc
cgccacaaggtggtcatcctggacgaggccgacagcatgacgacgggagcgcagcaggcg
ctgcggaggacgatggagatatacagcaacacgacgcggttcgcgctcgcgtgcaacacc
tcttcaaagatcatagagccgatccagtcgcggtgcgccatcgtgcgctacaccaagctc
tccgacaaggaggtcctggaacgcctgcttgtggtctgccgctccgagtcggtgccctat
gtggacgaggggcttggtgcggtcatcttcacagcggatggggacatgcggcaggcccta
aacaacctccaggccacctactatggcttcggcatgatcaccccggagcatgtcttcaag
gtgtgtgaccagccgcatccgctgctcatttctgagatcgtgaagaactgcaccgcggcc
aacatcgacggcgcgtacgatggaatgaagaaaatctgcgacatgggctacagctcaatg
gacatcattcagacgctgttccgggtggtcaagaacgacccaaagctgcccgagttcctc
aaacttgaattcatcagggaggtgggattctgccacatgcgcattgaggatggggtcaac
tcacgcctgcagctgagcggcctcctagcaaagctgtgcacaaaacagctgatggctcag
tggcgattggccctggagtag
DBGET
integrated database retrieval system
