Coccomyxa subellipsoidea: COCSUDRAFT_56884
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Entry
COCSUDRAFT_56884 CDS
T02914
Name
(RefSeq) Vps52-domain-containing protein
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_56884
Membrane trafficking [BR:
csl04131
]
Protein recycling
Others
EARP complex
COCSUDRAFT_56884
Endosome - Golgi transport
Tethering complex
GARP complex
COCSUDRAFT_56884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Sec3_C-term
DUF7491
Motif
Other DBs
NCBI-GeneID:
17039674
NCBI-ProteinID:
XP_005646234
JGI:
56884
UniProt:
I0YTH1
LinkDB
All DBs
AA seq
736 aa
AA seq
DB search
MSVTPHEDPQDFVDDENGNLASGANDDEGDDALPQDLSLGDLDITSSDVSLKGVEDELDT
YAGHEVLRAILDQGCDPKEYGRHYEARLRQAELESIQDYLSESDNLISSCDSILATMEGM
LGKFQADLGNISSEIRALQEQSQSMSVRLRNRKAAEAKLGTFLDNLALPPALIDGILLAP
PDAGFAEHLLALHKKLEFVRGNEMAAKSAAMHDIAPELERLRAKAVTKSRDLLMARIYQL
RKPKTNIQILQQNVLLKQKYLVTFLRQHGPEVFQEVRSAYVDTLSRVLSAHFRSYLAALE
RLQEDLAGPADVIGEAPGAGVGGVMANLFARGANAAHRDAFALGDRGNILHHLEQAAIIP
HVAESESKKAPFEVLFRSVNKLLMDTATAEYLFCCDFFQEDTIFNELFAATLAVVESALA
ASLQETFDLVGLLLMIRINYHHQLIMNKRRIPCLDDYLDRTNLLLWPRFKVILDMQLSSM
KAYTPPNFGQDPSLHFITQRYAMLTTSLLLLNADYQDGQMDHNIDRLRFAAMEVLLRLSK
RFARRRLGTIFVITNFHHIVQLLREAASRGGHMAHAAGTSPPPPTAPLGASGAETIKEFE
DQLTACTNIYVEEALVQQFVDLVRFVTEAEAAAKAGGVAEGSHAPGYGPQQAAPIMKDFA
SRWTAAIEALNKETMKDFRSSACGREVLKAAMTQLLLYYTRMLELLKRAGPEGAAVVRDA
VTIPSIMYEIKRFNRA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaactcctcacgaggacccccaagactttgttgacgatgagaatggcaatcta
gcaagcggagccaacgatgacgagggtgatgatgctcttccacaagacctgtctcttgga
gaccttgacataacgtcctcggacgtatctttgaaaggggtagaggacgagctggacaca
tatgcgggccatgaggtgctgcgcgcaatactggaccagggttgtgatcccaaggaatat
ggcaggcactacgaggctcggttgcgccaggctgagctggagtccatccaggactatctg
tctgaatcagacaacctcatcagcagctgcgacagtatcctggcgacaatggagggaatg
ctgggcaagtttcaggcggatctgggcaatatcagcagcgagatccgagcgctgcaggag
cagagccagtccatgagcgttcgcctgcgcaaccgcaaggcagctgaggccaaactgggc
acctttctagacaacctcgcccttcccccggccctcatcgatggcattctcctcgcaccc
cctgatgctggctttgcggagcatctgctggcgctgcacaagaagctggaatttgtgagg
ggcaacgagatggcggccaagtcggcagccatgcatgacattgctccagagctggagcgg
ctgcgcgccaaagctgtcaccaagtcacgagacctcctcatggccaggatctaccagctg
cgcaagcccaaaaccaacatccagatcctgcagcagaacgtgctgctgaagcagaagtac
ctggtcaccttcctgcgccagcacggccccgaggtgttccaggaagtgcgctcggcatac
gtggacacactgtcccgcgtgctctccgcccacttccgctcctatctggctgccctggag
cgcttgcaggaggatctggcgggtccagcggatgtgattggggaggcgccgggggcgggg
gtgggcggcgtgatggcgaatctattcgcgcgcggggccaatgcggcgcacagggatgcc
tttgcgctgggcgatcgcggcaacatcctgcaccacctggagcaggccgccatcatcccc
cacgtcgccgagtccgagtccaagaaggccccctttgaggtgttgttcaggagcgtgaac
aagctgctcatggacacagcgactgcagagtacctcttctgctgcgacttcttccaggaa
gacaccatcttcaatgagctcttcgcagcaacgctggccgtggtcgaatcagcgcttgca
gcatctttgcaggagacgtttgacttggtgggcctgctgctgatgatcagaataaactac
caccaccagctgatcatgaacaaacgccgcatcccctgcctggacgactacttggaccgc
accaacctcctgctctggccccgtttcaaggtgatattggacatgcagctgagcagcatg
aaggcgtacaccccgcccaacttcgggcaggacccttcgctgcacttcatcacccagcgc
tacgccatgctcaccacctctctcctgctcctaaacgcagactaccaggatgggcagatg
gatcacaatatagaccggctgcgctttgctgcaatggaggtgctgctgcgcctgtccaag
cgctttgcacgcaggcgcctgggcaccatcttcgtcatcaccaacttccaccacatcgtg
cagctgcttcgcgaggctgccagcaggggagggcacatggctcacgccgctggcacatcg
ccgcctccccccaccgcccctctaggagccagcggcgcagagacgatcaaggagttcgag
gaccagttaacagcgtgcacaaacatctatgtggaggaggcgttggtgcagcagtttgtg
gacctggtgcgctttgtgacagaggcggaggccgctgccaaggccggtggcgtggccgag
ggctcccatgcgccggggtatggcccccagcaggccgcgcccatcatgaaagactttgcc
tcacgctggaccgccgccatagaagccctcaacaaggagacgatgaaggatttcaggagc
agcgcatgcgggcgggaggtgctgaaggcggccatgacgcagctgctgctgtactacacg
cgcatgctggagctgctcaagcgcgccggccccgagggcgcagcagtcgtgcgcgacgct
gtcaccatccccagcatcatgtacgagatcaaacgcttcaaccgcgcttga
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