Coccomyxa subellipsoidea: COCSUDRAFT_57256
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Entry
COCSUDRAFT_57256 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K23288
syndetin
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_57256
Membrane trafficking [BR:
csl04131
]
Protein recycling
Others
EARP complex
COCSUDRAFT_57256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Amidase_5
Motif
Other DBs
NCBI-GeneID:
17038667
NCBI-ProteinID:
XP_005645232
JGI:
57256
UniProt:
I0YQL9
LinkDB
All DBs
AA seq
823 aa
AA seq
DB search
MQDVLEGYIFLGNISELGARLSHAFTSSVSSTVRQVVRSVILTRSGLEESARAGAPVQDM
VRGVPADLFRTCLARALMVVFDMMGSHQRMTNWHDSALDHNMSGLAKLREAKRACHARIR
QARSLPPLKFLASGALLPADGSGEGSGLIKAVSMRDTAPITTSVSFQASVGGSPRAPASP
RRRQKPAWAETLTAGPQLHRTSSKGSQALQLARSMGQAGADEEGQPQSVESFIEALAAKD
ALAELQGLEWREAEEVEWGDVLRVSQRGMWASRGFLWEEAARNIACLLACPAAWDGDHFL
QETHLIIIIIMIMIHYQYHMQAGNFFAAYHAENLEGLHGMLDKELWRRIPSGNAEAGGLW
QGLRGDGKLQKGGADSFDKILAAGNPWRRKHLRRRLAKQGSPALSFQLGFGGASALEEDR
AARKLEVDEHGIARRVSDDIWRTSAATTHAVLSDDEEDELLSGDSLWEDDRQTAKEAGNA
DGQQLGSMPMTNSALKLAKWMQVYGELLRSLRPAPFVYRGMCELFDMYLVHVYVAFSDVS
LADMLDSEAAEAKQAEAVSPRLRATLVRIVAGPLARFRASLTARQNKWLQQLAKDMGGEG
SQFLAHLKMADRRAASTAAAAPPSAAAALAQLSATPSTVPKLSHSGNQWGLQERVVAAAS
LEAFAEQLRQGKSAIQALLPAAEHPSLDAFFTRTVDAAGDVTDCLLRCGARLNFNLASTA
GTIAHQFWDISQPPMQASRWVEDVCRQAGYFGEKLAQVAGLTEHHRSQAFFLTEVEEFGQ
WAVTHPEYTREQQIGLATAVAQFKGLKKKDQATFVAQVEAFML
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgtgctggagggctacatcttcctgggcaatatcagcgagctgggcgcccgg
ctgagccacgccttcacttcatccgtcagcagcactgtccgtcaggtcgtgcgcagcgtg
atcctgacgcggtctgggctggaggagagcgcgcgcgcaggagcgcctgttcaggacatg
gtccggggggtccctgccgacctattcaggacgtgcctcgcccgggcgttgatggtggtg
tttgacatgatgggcagccaccagaggatgactaattggcacgacagcgccctggaccac
aacatgagcggcctcgccaaactgcgcgaagccaagcgcgcatgccacgcgcgcatccgc
caggcgcgttccctcccccctctgaaattccttgcttccggggcccttcttcctgcggat
ggcagcggtgagggcagcggcctcatcaaagccgtctcaatgagggacacggcacccatt
accacctcggtgagctttcaagccagcgtcggtggcagtccgcgcgcaccagcctcgccg
agaaggcggcagaagccggcatgggcagaaacgctgactgccgggccgcagcttcacaga
acgtcctcgaaggggtcacaggcgctgcagcttgcacgatccatgggccaggcaggcgcc
gatgaggagggacagccgcagtcggtggagtccttcatcgaggcgctggccgccaaggac
gctctagcagagctccaggggctggagtggagggaggcggaggaggtggagtggggggat
gtgctgagggttagtcagcggggcatgtgggccagccgcggattcctctgggaggaagcc
gcgcgcaacatcgcctgcctgctcgcatgccccgccgcctgggatggcgatcacttcctg
caggaaacgcatctgataataataataataatgataatgatacattaccaatatcacatg
caggcgggcaacttcttcgcagcctatcatgcagagaacctggagggcctgcatggaatg
ctggacaaggagctctggcgcaggataccctccggcaatgctgaagcaggaggtctttgg
caggggctgcggggagatgggaagctgcagaagggcggcgcagactcctttgacaagatc
ctggcggctggaaatccctggcgcaggaagcacctgcgccgtcggcttgccaagcagggc
tcgcctgcgctgtccttccagctggggtttggcggcgcttcagcgctggaggaggacagg
gctgcgaggaagctagaggtcgatgagcacggaattgcacgacgtgtgtcagatgacata
tggcggaccagtgcagccacaacacacgcagtgctgtcagatgacgaagaggacgagctg
ctgagtggggactcactctgggaggacgataggcaaaccgccaaggaggcgggcaacgcc
gatgggcagcagctgggcagcatgcccatgactaactcggcgctgaagcttgccaaatgg
atgcaagtgtacggagaactgctcaggagcctgcggccggctccgtttgtgtaccggggc
atgtgcgagctgtttgacatgtacctggtgcatgtctacgtggccttcagtgatgtcagc
ctggctgacatgctggactccgaggccgctgaggccaagcaggcagaggcggtgtcaccc
aggctgagggccacacttgtgaggattgtggccgggccgctggccagattcagggcatcc
ctaactgccaggcagaacaagtggctgcagcagcttgccaaggacatgggtggagagggc
agtcagtttctggcacacctgaagatggccgacaggagagcagcctccacagcagccgcc
gcgccaccgtcggctgcggctgctcttgcgcagctgtcagccactccctcaactgtcccc
aagctctcgcactcaggcaatcagtggggcctgcaggagagagtggtggcggccgcatcg
ctggaggcatttgccgaacagctgcggcagggaaaaagcgcaatccaggcgctgctgccg
gccgcagagcatccctcgctcgacgcgttcttcacccgcaccgttgacgccgcaggtgac
gtgaccgactgcctgctgcgctgcggcgcgcggctgaacttcaaccttgccagcaccgcc
ggcacaatcgctcaccagttctgggacatctcccagccgcccatgcaggcatcgcggtgg
gtggaggacgtgtgcaggcaggcaggctatttcggggagaagctcgcgcaggtggccggc
ctaacagagcaccacagatcccaggcgtttttcctgactgaggtggaagagtttgggcag
tgggccgtgacacatccagaatacacacgggagcagcaaattggcctggcgaccgcagtg
gcacagttcaaagggctgaagaagaaggatcaagctacatttgttgcccaagtggaggct
tttatgttgtga
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