Coccomyxa subellipsoidea: COCSUDRAFT_57748
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Entry
COCSUDRAFT_57748 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_57748
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
COCSUDRAFT_57748
TFIIIC, fungi type
COCSUDRAFT_57748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tau95
Tau95_N
Motif
Other DBs
NCBI-GeneID:
17038580
NCBI-ProteinID:
XP_005645148
JGI:
57748
UniProt:
I0YQD5
LinkDB
All DBs
AA seq
633 aa
AA seq
DB search
MTSVTQSIPEKNALLVEYPGYVKDSDAAIQTLGGLEAISATADGSSPVMSLHLRPGDPLS
HPLSGYKQSTRGLLLRISRNAGAATDSEEELKAEVMAHVKFAVRFPGLADFQYVSCDPRP
LHEQVAQQEGPPGLETEPMLFPPPLFTKQDLPMDYAFRSYYGADPDYMKTGVSSLGRGIG
RLAAHVINFQAVNVLAPLSDPGAEGAGLYKDRKLVLKDFSELMAERPIWSSAALKERVES
SFTDVEFDIMLPRIAYMFRNGPWRGLWVRRGYDPRSDPTSHKYQAVDYRGVERSAAEASG
SSGPSYKDVTSFAAIPVGECILQLCNLADDYIQSVIDKPAQLETCSLKSGWFSLEVWHEL
RERVESRFAALCQAATPSRGSAEAIGATQPAAAGQPGAGTNQQDSAGASSAATEQPQPNP
DAPQQDASMSERGGKPDVPPVHFPRESTQRAGNAGAGLAAAAEPPQPAGADVSAAGDFSM
ADDVSGVAEGAGPPGAAHDILPAVYLQSVLDSWQAEGPPPVAPSAAELLAASGGDAGDFE
IYEGSDEEGEEADAADDDAGLTEEAQTNDEAEDSDESADDRGQAAAGGDDAEGALGKGET
EGEEEESEESEEEESEMEDEDMEEAYNEDDDVG
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagtaacgcagtcaattcccgaaaaaaacgccctactagtggagtatcctggc
tacgtgaaagactcagatgcagccatccagactttgggaggtctcgaggcgatctcagcc
acagcagatgggtcttccccagtcatgtcgctgcatttgcgccctggagatccgctctca
catcccctttcgggatacaaacagagcacgcgtgggttgctgttgcgcatctctcgcaat
gcaggtgcagccaccgacagcgaggaggagttaaaagcagaggtgatggcgcatgtgaaa
tttgccgtgcgtttcccaggcttggcagatttccagtacgtctcatgtgatccccgaccc
ctgcacgagcaggttgcacagcaggagggccctccagggctggagacagagcccatgctg
ttccctccacccctgttcaccaaacaggacctgcccatggattatgccttcaggagctat
tacggggctgacccagactacatgaagacaggcgtcagcagccttgggaggggcatcgga
aggctggcggcccacgtcataaacttccaggccgtcaatgtgctggcccctctatctgac
cctggtgcagagggggccggcctgtacaaggaccgcaagctggtcctgaaggacttctct
gagctgatggccgagcgcccgatttggagcagcgctgctctcaaggagcgtgtggagtcc
agcttcacagatgtggaatttgacatcatgctgccacgcattgcctacatgttcaggaac
gggccttggagaggtttgtgggtcaggcgtgggtatgaccctcggagtgaccccaccagc
cacaagtaccaggcagtggactacaggggtgtggagaggagtgctgcagaggcgtctgga
agttcgggtccatcttacaaggatgtcacctcttttgcagccatcccagttggcgaatgc
atcctgcagctgtgcaatctggcggatgactacatacagagtgtgattgacaagccagcc
caacttgaaacctgcagcctcaaatcaggctggttctctttggaagtgtggcatgagctg
cgggagagagtggaatctcgctttgctgctctttgccaggcagctactcccagcaggggc
tcagccgaggccattggggctacacaacctgcagcagccggccagccaggagcgggcacc
aaccaacaggatagtgccggggcttccagcgcagccacagagcagccgcagcccaatcca
gacgcccctcagcaggacgccagcatgtcagaaagaggagggaagcctgacgtcccgcct
gtgcacttcccgagggagtctacccagagagcgggcaatgcaggggctggcttggcggcg
gctgccgagccgccgcagccggccggcgctgatgtcagcgctgcgggtgacttcagcatg
gcggacgatgtcagcggcgtggccgagggcgcggggcccccgggtgcggcgcatgacatt
ctgccggcggtatacctgcagtctgtgctcgacagctggcaggccgaggggccgccgccg
gtcgcgccgagcgccgcggagctgctggcggcttccggaggtgacgcaggggattttgag
atctacgagggttctgatgaggaaggggaggaagctgatgcagcggatgatgacgctggt
ctcaccgaggaagcccagacaaacgatgaggcggaagacagcgatgagtcagctgatgat
cgaggccaggcagcagctggaggggatgatgcagagggtgctttgggaaaaggggagact
gagggcgaagaagaagagtctgaagagtcagaggaggaggaatcggagatggaagatgaa
gacatggaggaagcatacaatgaggatgatgacgttggttga
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