Coccomyxa subellipsoidea: COCSUDRAFT_58290 Help Entry COCSUDRAFT_58290  CDS       T02914                                  Name (RefSeq) DNA repair helicase   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism csl  Coccomyxa subellipsoidea Pathway csl03440   Homologous recombination csl03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     COCSUDRAFT_58290    03460 Fanconi anemia pathway     COCSUDRAFT_58290  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:csl03400]     COCSUDRAFT_58290 Enzymes [BR:csl01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      COCSUDRAFT_58290 DNA repair and recombination proteins [BR:csl03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      COCSUDRAFT_58290    FA (Fanconi anemia) pathway     Downstream FA components      COCSUDRAFT_58290 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Helicase_C_2 DEAD_2 DEAD ResIII Motif Other DBs NCBI-GeneID:  17037514 NCBI-ProteinID:  XP_005644086 JGI:  58290 UniProt:  I0YMC3 LinkDB All DBs AA seq 1621 aa AA seqDB search MAKVIQTVANRENALLEAPTGSGKTLSLLCSALSWQRKLKQEGYSEAWEGRPNIPDDGQG QETPEGKSVKTPPEPISCTPPGSGSAGSTEGEVTPNGAPPREPLPRIFYATRTHSQIAQA SRSHYCVHSGVSKKPNVDEECEKLLEDRSCRYFNNLPKVLNGLATYVPQVHDIEDLVQVG KEIKACPYFVARKIAEHAELLFCPYNYLIDPVIRSSMGINIQHAVIIFDEAHNIEDISRD AASVEMERASMVDVQKAFEYKCLEADSREIYGPLADAFGRFANWLKERCERPDVRKQQGA GQRYEGITSGLQMREELEEAGLGKEQVDLLHELYVKARAEEQKKEEPPAPALAEEDGASE HQLQNVASSQAKKKGAGFALGQTSRLLTILNLMYSSNVSDYRLALQRWYRSSQPRRRGRR REDDEEDEVAGWALQFCLWCLNPAVAFHSIAAAARSIILTSGTLSPLDSFASELDTSFPV RFEAPHVINARLQVWAGSICAGPDDVKIAATYEHSLKPDFQDSVGASIAAIAGIVPDGLL VFLPSYVMLDRLMERWKVTGVWAQLQQTKAIVCEPRGTGDAFDAVMSDFYTAIREGRGAI FFAICRGKVSEGLDFTDKNARAVIVVGIPFPNVKDTKVNLKKKYNDAGQRDRSRSLLTGD QWYSQQAFRALNQAVGRCIRHKLDYGAIVLLDRRFSNTANQRHLSRWVRTSINVHESFAP ALESMKEFFARLEANPPGNVLPKEPEYPAAKDARTGAAGQNEKTQLKEADAKSSQFASHS QPTLNAVWKHVPSRLRQLPGRPCPPAQRVPALKMEPLPPNHCDAEPAPAALEPAEAQLPP TQTRGRGVEAVFGSALDPTSPASEASTLPPGSGETHPEPRLNSHAEASTSAMFSGGTRRG DGQSSAGPRDAWQSGQQGSYRDFAQREAPIHRSTVEAASPARSTLQPTPGQAPTLAQDTL SPQRPWQQAPANAAQHLMSRSGLHRGRGRGGAPGLLQSPGGPSPSQWGAPNPASFTEQQQ QRWGAEDSPGHLHAASSNQSGGLQHGNQPSWPQQSGSGAQESPRESARDTNTQDWVNRCG APPAWQQPGHVSHDSPGGSCTLAGGDQQVGTPAWQQPGHVSHDSPGGSQTAVRSGQQAGT PAWQQQQQQVLQGGGAHGGPGGNSGRTPGGLVSASWQAQRLPGQLHCPETPPSVSGRDHA SWQPAAFSARITHPPHSLAAAATHASAAPTSPPPLQQEAAVREMQAAWTDGECQWVNGQE EASALVELLPVSVVQEWLRADVAENVAYLLNEPGVMHNDMAEVEEKAHEAIQFCFDYARE LLEEGGELEQLLNSWACPPPMGMQAIAAACGCGAEPPPLPGMVAAASAALLAHLQSLPSL QAVQEMQAVYAEAGELSFVSSTPVRTQQYASAPQPDAAAWPQSLPNRASVGSASSDSAVD GSGIFTPPHVRSGMLQPPSGAEPHSEGGGYGSPAVPVRDSEAAAEPVPWRSPLPQSDAPL RAPLSPTAANRGREPSFAGEAKLLQAGAEGRTGPKSHAAPLGRDDSGSGGRSGQKRGSDG GNKGGSGGNPAPDQDAAGHERKRCALSRNQAEALARRGGQAAGPRLAAWTQNSDDTDDFM M NT seq 4866 nt NT seq  +upstreamnt  +downstreamnt atggcgaaggtcatccagacggtcgccaacagggagaatgccttgctggaagctccaaca ggcagtggaaagaccctgagcttactatgctcagccctgtcttggcagcgcaagttgaaa caggaagggtattcagaagcatgggaaggcaggccgaacataccggacgatggccaaggc caggaaactccagaaggcaagtctgtcaagacacctccagagcccatcagctgcacgccg ccaggatcaggttcagcagggagcactgagggcgaggtcacccccaatggagccccccct cgggagccgctccccagaattttctatgccacccgcacccacagtcagatcgcgcaggct tctcggagccattactgcgtgcacagcggggtctcaaagaagcccaatgtggatgaggag tgcgaaaagctcctggaggaccgctcctgccgatacttcaacaacttgcccaaagtgctc aacgggctggccacctatgttccacaggtgcatgacattgaggacttggtgcaagtgggg aaggagatcaaggcctgcccatactttgtagctcgcaaaatcgcagagcatgctgagctg ctgttctgcccctacaactacctcatagaccccgtcatccgcagttccatgggcatcaac atccagcacgctgtcatcatcttcgatgaagcccacaacattgaagacatcagcagggac gctgcctccgtggagatggagcgtgcctcaatggtggatgtgcagaaggccttcgagtac aagtgccttgaggccgacagcagggagatctatggacccctggcagatgcctttggcagg tttgcaaactggctgaaggagaggtgtgagcggccggatgtgcgcaagcagcagggagca ggccagcgctatgaaggcatcacctcagggctgcagatgcgtgaggaattggaggaagct ggcctggggaaagagcaggtggatctcctgcatgaattgtacgtgaaggcaagggcagag gagcagaagaaggaggaacctcctgcaccagccctggctgaggaagatggggcttccgag caccagctgcagaacgttgcatccagccaggcaaagaagaagggggctgggtttgcgctg gggcaaacttcacggctgctgacgatcctgaacctgatgtactcgagtaatgtcagcgac taccgcctggctctccagcgctggtaccggtccagtcaaccacgccgcaggggccgcagg cgtgaggatgatgaggaagatgaggtggcggggtgggcgttacagttctgcctttggtgc ctcaacccggccgttgcctttcacagcatcgccgcagcagcccgctccatcatactcacc tccggcactctctctccgctggactcttttgcctcagagctggatacctccttccctgta cgctttgaagcgccacacgtcatcaacgctcgcctgcaggtgtgggcaggctccatctgt gcaggcccagacgacgtgaagatagccgcgacatatgagcacagcctcaagccagatttc caggacagcgttggcgccagcattgcggccattgctggcatcgtgccagatgggcttctg gtctttcttccctcctatgtcatgctggatcgcctgatggagcgctggaaggtgacgggg gtctgggcgcagctgcagcagaccaaggccatcgtgtgcgagccgcgcggcaccggcgac gcgtttgatgccgtcatgtctgatttctacaccgccatccgcgagggccgcggcgccatt ttcttcgccatttgccgcggcaaggtgtctgaggggctggacttcacggacaagaacgcg cgcgcggtgatagtggtgggcatccccttccccaacgtcaaggacaccaaggtcaacctc aagaagaagtacaacgacgccgggcagcgcgaccgctcgcgcagcctgctcaccggcgac cagtggtacagccagcaggccttcagggcgctgaatcaggcggtggggcgctgcatccgc cacaagctggactacggggccattgtcctgctcgaccgccgcttcagcaacacagccaac cagcgccacctgtcacgctgggtgcggacatctatcaatgtgcacgagtcgtttgccccg gcgctggagtcgatgaaggagttctttgcgcgactggaggcgaaccctcctggcaatgtg ctccccaaggagcctgagtacccagcagccaaggacgctcgcacaggagctgccggccaa aatgagaagacccagctgaaagaggcagatgcaaagagcagccaatttgcgagccactcg cagccgacccttaacgcggtctggaagcatgtgcccagccgcctgcgccagctgcccggc cggccctgcccgcctgcccagcgggtacctgcgctgaagatggagccgctaccgcccaat cactgtgatgcggagcctgcccctgccgctcttgagcctgcagaggcgcagctgccgcca acacagacaaggggcaggggggtggaggccgtctttgggagcgctctggaccccacatca ccagcctccgaagcatcaacgctccctccaggctctggagagacacaccccgagcctcgc ctcaacagccatgcagaagcctcgacctctgccatgttcagcggtggaacgcgaagggga gacggccagagcagcgcaggaccgcgtgacgcgtggcagagcggccagcaggggagttac agggactttgcgcagcgtgaggctcccatacatagaagcacggttgaggctgcctccccc gcgaggtccaccctgcagcccaccccagggcaggcgccaactttggcgcaggacaccctg tcccctcagcggccctggcagcaggcgcctgccaacgcagcccagcacctcatgagccgc tccggcctccaccggggccgcggccgcggcggcgctccagggctcctgcagagcccgggt ggtccctcaccctcacagtggggggccccaaatcctgcctccttcacggagcagcagcag cagagatggggtgcagaagacagcccagggcatttgcatgcagcctcgtccaaccagagt ggtgggttgcagcacggcaatcagccgagctggccgcagcagagcggctccggagcgcag gagagtcccagggagtccgccagggacaccaacacccaggactgggtgaaccgatgtggg gcgccgccagcatggcagcagccgggccacgtgtcacatgacagcccaggagggtcctgc acacttgccgggggggaccaacaggtgggcacgccagcatggcagcagccgggccacgtt tcacatgacagcccaggagggtcacagactgcagtcaggagtggccaacaggcggggaca ccagcatggcagcagcagcagcagcaggtgctgcaggggggtggtgcgcatgggggcccg ggggggaattctgggaggactccggggggacttgtcagtgccagctggcaggcgcagcgg ctgccggggcagctgcattgcccagagacgcccccaagtgtcagcggccgagaccatgct tcctggcagcctgcagccttctctgctcgcatcactcaccctccccattctctggcagca gcggcaactcatgccagtgcagctcctacctctcctccaccactgcagcaggaggcagct gtgagggagatgcaggcagcctggacggatggggagtgccagtgggttaatgggcaagaa gaggcatcggcgcttgtcgagttgctgcctgtgagcgtcgtgcaggagtggctgcgggct gatgtggcagagaacgttgcttacctcctcaacgagccgggtgtcatgcacaatgacatg gctgaagtagaagagaaggcacacgaggcgatccagttctgctttgactacgccagggaa cttctggaggagggaggagagctggaacagctgctcaacagctgggcttgtcccccgccg atgggcatgcaggccattgctgccgcctgcggctgcggcgcagagccgccgcctctgccg ggaatggttgctgccgcgtcagccgccctgctggcgcatctgcagtccctgccttccctc caggccgtccaggagatgcaagcagtgtatgctgaggcgggagagctgtcattcgttagc agcacgccagtgcgaacccagcagtacgcttcagcaccacagccagatgcagccgcctgg ccgcagtcccttcccaacagagcatctgtagggagcgcgagcagtgattctgcagtcgat ggctccggaatcttcaccccgcctcatgtaagatctggcatgctccagccccccagcggc gcagagcctcacagtgaaggcggcggctatggcagtcctgctgtccctgtgcgagactca gaggctgctgcggagccagtgccatggagaagccccttgccccagtcagatgctcccctg cgtgctcccctgtccccgactgcagccaaccgtgggcgtgagccgagctttgctggagaa gcaaagctcctccaggcgggtgcagagggaaggacaggtccaaagtcccatgctgcaccg ctcggcagagatgacagcggcagcggcgggaggtcggggcagaagcgggggagtgacggg ggtaataagggggggagcggagggaacccggcgccagatcaggacgcagcaggccacgag cgcaagcgctgcgcgctgtcgaggaatcaggcggaggcgctggcgcgccgtggcggtcag gcggccgggccgaggcttgcggcgtggacgcagaattcggatgacacggatgatttcatg atgtga

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