Coccomyxa subellipsoidea: COCSUDRAFT_58851
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Entry
COCSUDRAFT_58851 CDS
T02914
Name
(RefSeq) TRAUB-domain-containing protein
KO
K14782
protein AATF/BFR2
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_58851
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
90S particles
Other 90S particles
COCSUDRAFT_58851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AATF-Che1
TRAUB
CFAP70_helical
Motif
Other DBs
NCBI-GeneID:
17044322
NCBI-ProteinID:
XP_005650856
JGI:
58851
UniProt:
I0Z6P3
LinkDB
All DBs
AA seq
454 aa
AA seq
DB search
MFGEDAVVEETDDELENGHHRPRKGEKGLPLRGGIDLDDPEYEGRRVSRDAVFGDESEDA
ISEDEDVETGSEEYESEGQLGDEQGARAEPESAVTNGADIFEDEVDEEAAALEREFEAAR
AGTTAADMAITNRDRAARERAKGTAVKNQRALWERMLELRILLQSCLQASNRLVRPHMHV
AACAVAPELRSGFHGLADGAAATLDSLLDLHDELLERVPDRAAAAATEPPAEAVMGKTGK
KRGRDGAAGDDLLSGTKWARMNAAYGSFAPFRDASMDRWHRKTMLMTGSGALRNNLRALN
QSLSSQVAALVTDSGPAVQRTQLMTAQIRPLMGRASAQADQDEDADDEDEPDETVLDARD
AETFDDGEFYQQLLKEFLEGSGVDAAAVNASAQGGKKKRKKVDRRASKGRKLRYQVMEKL
VHFMTPVERAEAPTLATQLFANLFGQGRSMAGGA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagaggatgctgtggtggaagagacagatgatgagctcgaaaatgggcaccac
aggccaaggaagggagagaaggggctgccgcttaggggaggcatagacttggatgaccca
gagtatgaaggaagaagggtcagccgagacgccgtctttggtgatgaatctgaggacgcc
atttcagaagacgaggacgtggagacaggttctgaggagtacgagtcagaggggcagctg
ggggatgagcagggggccagagcagagccagaatctgctgtcacaaatggggcagatatt
tttgaggatgaggtcgatgaggaggcggctgcgctggagcgcgagtttgaggcggccagg
gccggcaccaccgccgctgacatggcaattactaaccgggacagggcggcgcgtgaaagg
gcaaaggggacagcggtgaagaaccagcgcgccctgtgggagcgcatgctcgagctgcgg
atcctcctgcagagctgcctgcaggcgtccaacaggctggtccggccgcacatgcatgtg
gcggcatgcgcggtggcgccagagctgcggtcaggcttccacggcttggccgacggcgca
gccgccacccttgactcactcctggacttgcacgacgagctgcttgagcgcgtgcctgac
cgcgcggcagccgccgccaccgagccgccagcagaagccgtcatgggtaaaaccggcaag
aagcgcggccgagacggcgctgccggggatgacttattgtctgggaccaagtgggccaga
atgaatgcggcgtatgggagcttcgctcctttccgggacgcatcaatggacaggtggcac
cggaagaccatgctgatgacaggcagtggcgctctccgcaacaacttacgcgccctcaat
cagagcctctcttcacaggtcgcagcattagtgacggactctggaccggcagtgcaacgc
acgcagctgatgaccgctcaaatcaggcccttgatggggcgggcgtccgctcaggcagac
caggacgaggatgcagatgatgaggacgagcctgatgagactgtgttggacgcgcgcgat
gccgagacgtttgatgatggagagttctaccagcagctgctgaaggaattcttggagggc
agcggggtggacgctgcagcggtcaacgcctccgcacaggggggcaaaaagaagcgcaag
aaagtggatcggcgcgcctccaaggggcgaaagctgaggtaccaggtcatggaaaaactt
gttcacttcatgacacctgtggagcgtgcagaggcgcccacgctggcaacacagctgttt
gccaatctgttcggccagggcagaagcatggcaggcggagcatga
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