KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_58928
Entry
COCSUDRAFT_58928  CDS       T02914                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14768  U3 small nucleolar RNA-associated protein 7
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_58928
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    COCSUDRAFT_58928
SSDB
Motif
Pfam: BING4CT WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_TEP1_C B-prop_COPA_B_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF4 WDR54
Other DBs
NCBI-GeneID: 17044401
NCBI-ProteinID: XP_005650935
JGI: 58928
UniProt: I0Z6X2
LinkDB
AA seq 550 aa
MEESSDAEIKEKVSKKRGRGESETAQRMAKFKRGAAVATRAIADKKLKGQLRHSEKLAAE
AAYKAAKAEQWLLPEEAGTLEAEGLERTWRFSQEEIVREAETGAAQKVFDLDLPELGPYN
LGFTRSGRHMLLGGRKGHLAIMEWQQRHLVCEVQVRETVRDATFLHNEQFFAAAQKKYVY
IYDKRGLEVHCLKEHTGVRRLEFLPYHFLLASIGEGGVLRYQDTSTGQIIAQHRTKMGTC
DAMRQNPWNGVMQLGHANGVVSMWTPNVTTAVVKMLCHRGPVRAIATDTQGQHMVTAGAD
GQVKVWDVRKLQPMHSYFSRAPADTLDISQRGMLAVGFGRNVQVWKDALAQKQESPYMRH
TLPSGVLRDFQFCPYEDVLAVGHSGGVSTMLVPGAGEPHYDSRVADPFQGRKARREQEVA
HLMDKLQPDMIVLDPSTIAQARSVRKEPKDVAEERKAEAAAANASRRKEQEEKNEGKKRM
KGKNKPSRRQKKKQANIIEARAAPAGKPELRQRMREQGVLSGGGAEKKQPAPIPEDVPRA
LHRFYKKGVQ
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggaagaaagtagtgatgcagaaatcaaggaaaaagtctccaaaaaacgggggcgagga
gagagcgagacggcgcagcggatggccaagttcaagcgcggcgctgctgtggcaacgcgc
gccatcgccgacaagaagctgaaggggcagctgcgccacagcgagaagctggcggcagag
gcggcgtacaaggctgccaaggcggagcagtggctgctgcctgaagaggccggcaccctg
gaggctgagggcctcgagcgcacctggcgcttctcacaagaggagatagtgagggaggcg
gagactggcgctgcgcagaaggtgtttgatctggacctgccggagctgggcccttacaat
ttggggttcacgcgcagcgggcgccacatgctgctggggggccgcaagggccacctggcc
atcatggagtggcagcagcggcatcttgtttgcgaagtgcaggtcagagaaacggtgagg
gacgccacattcctgcacaatgagcagttcttcgcggcggcccagaagaagtacgtgtac
atctatgacaagaggggcctggaggtgcactgcctcaaggagcacacaggagtgaggcgg
ctggagttccttccgtaccatttccttctagcgtccataggagagggaggcgtcctcaga
tatcaggacaccagcaccgggcagataattgcgcagcacaggacaaagatgggcacatgt
gacgctatgcggcagaacccgtggaacggtgtcatgcagctgggccacgccaatggggtc
gtgtccatgtggacgcccaacgtgaccaccgcagttgtcaaaatgctgtgccatcggggg
ccggtgcgtgcgattgcgacggacacgcaggggcagcacatggtgacggcgggcgcggac
gggcaggtgaaggtgtgggacgtgcgcaagctgcagccgatgcactcctacttcagccgc
gcgccagccgacaccctcgacatcagccagcgcggcatgctcgccgtcggcttcggccgc
aacgtgcaggtgtggaaggatgcgcttgcgcagaagcaggagtcgccctacatgcgccac
acgctgccaagcggcgtgctgcgcgacttccagttctgtccctacgaggatgtgttggcg
gtgggccacagcgggggcgtgtcgacgatgctggtgccgggcgcgggtgagccgcactac
gactcgcgcgtggccgaccccttccagggccgcaaggcgcgccgcgagcaggaggtcgcg
cacctcatggacaagctgcagcccgacatgatcgtgctcgacccctccaccatcgcgcag
gcgcgctcagtgcggaaggagcccaaggatgtggcagaggagaggaaggcggaggcggcg
gctgcaaacgcgtcgcgcaggaaggagcaggaggagaagaacgaggggaagaagcgcatg
aagggcaagaacaagccctcgcgccgccagaagaagaagcaggccaacatcatcgaggcg
cgtgccgcccctgctgggaagccggagttgcggcagcgcatgcgggagcagggcgtgctg
agcggaggtggtgccgagaagaagcagcccgcgcccatcccagaggacgtgcccagggcg
ctgcacagattctacaaaaagggcgtccaatga

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