Coccomyxa subellipsoidea: COCSUDRAFT_59229
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Entry
COCSUDRAFT_59229 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csl04121
]
COCSUDRAFT_59229
Enzymes [BR:
csl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
COCSUDRAFT_59229
Ubiquitin system [BR:
csl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
COCSUDRAFT_59229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
zf-C3HC4
RING_XB3-XBAT31
zf-RING_2
TackOD1
Rad50_zn_hook
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
17044722
NCBI-ProteinID:
XP_005651256
JGI:
59229
UniProt:
I0Z7U3
LinkDB
All DBs
AA seq
1216 aa
AA seq
DB search
MELKAPQAGQQSLSGLGDVTELQLELLLPYSWQYEPEARTRSQQVHNIRDVLLWLLPQIS
PQARTSDNQAGPSTPRKPRILSSPGSPHSPKGGGSNQAFDEVVEDIAEADALEIYTAVKP
SGTERELEATLPQLTSTLHRHQRRAAAWMVDREIAAEAPSASDELHPLWREVTCLDGQRF
YVNPYTGLLTRTRFSKPNRVPGGILADEMESDARPKHERIDCTCPVTGDTPGAEDYAGLW
VQCDECQAWLHGHWAYICPKCIRAHANALVTVDCGATLIVSPASILKQWQTEITKHTHPG
ALKVLVYEHAGLDAERGAPSKGLSARDFAAADVVLTTYETLQKDVNRQGNVTTYALRQAK
KYEVLPTPLTRLRWWRVCLDEAQLVESTTAKAAKLAVNIQAQHRWCVTGTPLSRGLEDLY
GLFYFLHAHPYSDRFWWHEVLQKPYVAGCPAGRKRLMAQLKPAEGGIFWRTSKADVAHEL
ALPPQSHRTTFLTLSAIERHFYMRQHQANTLLHADCASKARAVLPAELLAALEAGRAGDE
AFRRLTRAEEKSLLGNLLRLRQACCHPQVGSRGIKALNAAKTPLSMDSILEVLVEKARVE
AEDAQRILLSALNGLAGLMLIEDDKTQAVALYRQVLATAEGNKALIRLDPLQKLHTLSNL
AELLGSGVPGVPHTLRDDSLGAEAEKIREEYLVQWVAKVAAAEKDYRAALDHMERPGAAA
EQSETAAWFKGPGRSGGAAPSSSSAPAASEEVELWYLDAIDLILQNSDDYGERAASAIRD
QLSVIDEMRRKTERNATSLARRITGLAGLKLLLRNELGASAAAREKALKMLQDLSDVNHA
RPDSLVEQAATCGRCRSELGEAGRVCRHCKMDDVWLGWEMRLFRLDTRAMEAGAHVSPED
ALRQAQAATLRHIGRGGLDEEAAMQAGGDGAAGASDMGRELVSTVEIVRHPSEAEQVLRM
LPGQLRGLKHLPQRAAAQREALLAAAKAALDRLEAGRRVFLRGRALALAQRFALYARDEL
AMSTLRIRVRVSGEYVKPHEVHFKLHPAEIPVKNKELTTERIVAEADLNKQLGTLRYLRG
LRAARQRMQAGAERAEQAPDKQNSEPAAVSSEAAAEVEVCPVCQEPLGQELTMLPCGHQL
CVRCHMAILDRIPPYIPMVNRHIHCPTCRARTKVTDIALVDAGRSAAKEEGQSDALADEE
QIVVSGSYSTKGQKNA
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaaggcgccccaggctgggcagcaaagcctgtcaggcttgggggacgtcaca
gagcttcagctggagctcctgctgccttacagctggcaatacgaaccagaggcacgaact
cgcagtcagcaggtgcacaacatccgcgatgtgctgttgtggctgttgccacagatatca
ccacaggcgcgcacgtctgacaaccaggcaggccctagcacgcccagaaaaccgcgaatt
ctgagcagccctggctcgccccacagccccaagggcggtgggtccaatcaggcctttgat
gaggtggttgaggacatagcagaggcggacgcactggagatatacacggctgtcaagccc
agcggcacggagagggagctggaagccaccctgccacagctgacatcgacgctgcatcgc
caccagcgcagggctgcagcctggatggtggacagagaaattgcagcagaggctcccagt
gcgtctgacgaactgcacccactgtggcgggaggtgacctgtctggatgggcagcgcttc
tatgtcaacccatacactgggctgctcactcgcacccggttttcaaaacccaaccgagtg
ccgggaggcatcctggctgatgaaatggagagcgatgcgcggccaaagcatgagcgcatc
gattgcacctgccctgtcactggtgacacgcctggggcagaggactatgctgggctgtgg
gtgcagtgcgatgagtgccaggcatggctgcatggccactgggcctatatctgccccaag
tgcatcagagcgcatgcaaatgcactggtgacggtggactgtggtgccaccttgattgtg
agcccggcttccatattgaagcagtggcaaaccgagatcacaaagcacacacatccagga
gccctcaaggtgttggtgtacgagcatgctggcttggatgctgagcggggggcgccaagc
aagggcttgtctgcccgcgattttgctgcggccgatgtagtgctcaccacctatgagaca
ctgcagaaggatgtcaacaggcaaggcaatgtgacaacttacgccctgcgccaggcaaaa
aagtacgaggtgctaccaacaccgctgacaaggctgcgctggtggcgggtatgtctggac
gaagcccagctcgtggagagcaccacagcaaaggctgccaagctggccgtcaacatccag
gcgcagcacaggtggtgtgtgacgggaacgccgctgagcaggggcctggaggacctgtat
ggcctgttctacttcctgcatgcgcacccctacagcgaccgtttctggtggcatgaggtc
ctgcagaagccatacgtggccggctgccctgcaggtcggaaacggctgatggcgcagctg
aagccagccgaggggggcatattctggcgcacctccaaggctgacgtggcgcatgagctg
gcgctgccgccacagtcccaccgcaccaccttcctcaccctctccgccatcgagcgccac
ttctacatgcgccagcaccaggcaaacaccctcctacatgctgattgtgcaagcaaggcg
agggcggtgttgccggcagagttgctggcagcgctggaggccggccgcgcgggtgatgag
gcgttccggcggctgacgcgcgccgaagagaagtcgctgctgggcaatctgctgcgcctg
cgccaagcctgctgccacccccaggtgggcagccggggcatcaaagcgctgaatgctgcc
aagacgccgctgagcatggactccatcctggaggtgctggttgagaaggcgcgggtggag
gcagaggatgcgcagcgcatcctgctgtcagccctcaacggcctcgctggcctcatgctg
atcgaggatgacaagacgcaggccgtcgctctttaccgccaggtgttggcgacggccgag
ggcaacaaggcgctgattcggctggacccgctgcagaaactgcacacgctgtccaatctg
gccgagctgctgggcagcggagttcccggcgtgccgcataccctcagggatgactcgctg
ggggcagaagccgagaaaatccgcgaggagtacctggtgcagtgggtggccaaggtggcg
gccgctgagaaggactacagagcagcgctggatcacatggagcgccctggcgcggctgca
gagcaatctgagacggctgcatggttcaagggtcctggcagatctgggggcgcagcacca
agcagcagcagcgccccagcagcatcagaggaggtggagctctggtacctggacgccatc
gacctgatactgcagaacagcgacgactatggcgagcgcgcagcctcggccatccgagac
cagctctctgtcatcgacgaaatgcgacggaagacggagaggaatgccacaagcttggcg
cggcgaatcactggcctggccggcctgaagctcctgctgcgcaacgagctcggggcctcg
gcggccgcgcgcgaaaaggcgctgaagatgctgcaggacttgtcagacgtcaatcacgcc
cggcctgacagcctggtggagcaggcagcaacttgcgggcggtgccggtccgagcttgga
gaagcaggacgagtgtgccgccactgcaagatggatgacgtgtggctgggatgggagatg
cgcctgttcaggctggacacgcgcgccatggaggccggcgcccacgtgtccccagaggac
gccctccgacaggcgcaagcggccacgctgcggcacattgggcgcggcggcctggatgag
gaagcggccatgcaagcgggcggggacggggctgcgggcgcgtctgacatgggacgagaa
ctggtatcaacggtggagattgtgaggcaccccagcgaggcggagcaggtgctgcgcatg
ctgcccggccagctcagaggcctcaagcacctccctcagcgcgcagctgcgcagcgggag
gcgctgctggcggcggccaaggcagcgctggatcggctggaggccggccgccgtgtgttc
ctgcgcggccgcgcactcgcccttgcgcaacgcttcgcgctctatgcccgcgacgagctc
gccatgagcacgctgcgcatccgggtgcgggtatcgggggagtatgtcaagccgcacgag
gtacacttcaagctgcatcctgccgagatccccgtcaagaacaaggagctgacaacggag
cgcattgtagcagaggcggacttgaacaagcagctgggcacgctgcggtacctgcgcggc
ctgcgcgctgcacgccagcgcatgcaggcaggtgccgagcgcgctgagcaggctccagac
aagcagaacagcgagccagctgcagttagcagcgaggcggctgcggaggtggaggtgtgc
ccggtgtgccaggagccactggggcaggagctgacgatgctgccctgcggtcaccagctg
tgcgtgcgctgccacatggccatcctcgaccgcattcccccctacatccccatggtaaac
aggcacatccactgcccaacgtgccgggcgcggacaaaggtgacggacatcgcgctggtg
gacgccggccgctcggcagccaaggaggagggacagagtgatgcgctcgcggatgaggag
cagatcgtggtcagcggcagctacagcaccaagggccagaagaatgcctga
DBGET
integrated database retrieval system
