Coccomyxa subellipsoidea: COCSUDRAFT_59297
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Entry
COCSUDRAFT_59297 CDS
T02914
Name
(RefSeq) hypothetical protein
Organism
csl
Coccomyxa subellipsoidea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_2
Motif
Other DBs
NCBI-GeneID:
17044798
NCBI-ProteinID:
XP_005651332
JGI:
59297
UniProt:
I0Z819
LinkDB
All DBs
AA seq
2361 aa
AA seq
DB search
MCSQDSESLQRPALQENAFQPLLTPGGPLALSPPRTLRSSQKWGSLSASRILGLSPNGSR
LRGKSLVLSPMCSRAAPASQGHPPQTGVEGAQPREQLQDSSSHDFVPPAGAAPPGRMCHS
QPCPLSRPWPDDSGRAENPSTPARRTETPDLGSPGKDRAVLVELDASGAGAGTAMGECDG
RHADVRPAKDQPGGSELPSSAEPGLQSREQADDHILAPARHHSNAAAADAALAAPGTGDM
GAAGSMGPSQMGGTLDSGYSLQLNLSLGSQDDRILPTEVEPRSTEVTARQVLATEMQLTG
GFFSETQVEAALPAGDICVPLPAELAANPGTSAEHPAFCPETQILDCSTPPPAPLSASTP
AAQLVAPPTQQKSDIAEALPAQQAAATEVQLESGLAIAAGDNTPAEAPQVSGALACSAAA
QDRQEHLPVPVSPEPAAAVATANGAIPVQPRLEVRLEVMAEQTYSPQMGAREQAHGQTLL
ETPEPSTGGACPARTPASRGPTMSLGLLSEDFISESEGTQRAVMAAKIIDEYNLKFHRGV
SDGAVFNFVLTTDMETVAACIATKPALIPAEEYSMWERRLVEARRDQEMLDWDVEGTGEP
GITEELGGLTQEAVALLCTEDEIASRREELGATGRVKKRELTREPVQVMKSITAEAFCSA
SEAQPSSAANSESQCQLPPPLPPRPENNSTGGQLHTSSFLVNSSVAAAGSVATGSAAELR
IEAVDLPLSERDVNEAVQGVMDSLLAAVIQPPAALCDHASGYAAAADEPDAAAEPDASCA
AMDIDTGEGGGAHAAEQPKEAALEPAPKAQQQAAAAAVAAVPAREHAPAGAADDEDDFSS
LPLMLLLDTQYPESQRLAAAAQLSDNALDRTASGQAAEAHALPASVPESDAVQFQHREPS
AAAGAPEAEAAVSAGPSQAAKGPSARSQDDVWGTILSTNTQPSGSGPPAHKTPAWQASSG
LAVGIGGKQPNQSQPSPGSRGWQREVGSTGLRLRPVWGLAPASREATPLTGDSLLTPPKR
VVGPPSAEAARTGGLPGSPETPSQIAATADVLQLYSRPQQDIRTPGSGDKRQRPCARESP
ESSGIEPTRKPDVGGHAEAGGASEHVPAAAGASPLSSEPPGSFVPDTYPGIGANTGSPAH
PADHGTAEEHAVAQEHVDECLQDDRAAEVPPPKRRRLSLEGGRGQKGSDHLQARAAQAGG
KDSPRKGLHAMGAHPRGMRAAGAMPVTRALASEIGRDAAPRMTRQQAQVAKQQRKGALVR
AGVLRRAGQIRQPVRPSSAGRRWAGTFGKLPAQPAQPTLKRRRTATPGGEARVDGRQLED
RKAHAAEQDEEVSSPEPELAGQDTEARGKQADVRLGVTSATALPVVRRAEQQQQGLPGGL
RSGKLRDPYSFPESQDVRLENPARSRAGLAPRVHFAHISRRSHAQAQPPVKGLAGSTLQH
GTRRDAAQDAVDTSRGVRTRRTGVEARNADPEPAGCHERPQRAKRQPLRLEDYQQGTLAQ
ATQPVRVSPLRAGRKGGAGEEASGKAAGGPRRQLVSFRELERRQQMRAAVCAPPEDQGVE
ESGDSGAVSARANGDDEPIMQLAEAASEDMAESAQPAEQEAAECASSGRAAEQQEPVHKA
VEKPPGPQKLGCSKCRHSKNGCRACRPAAAGAASPAASPKRVPPQKRKRRASLPEEPPSL
QDNSAGAQHRRQSAARRKSEPAAVFDAKSGAFGGKAFLVTGFKDARERRRITKLITDHGG
SVIDSIPLPEEQKTVHGVVAGRACDRRTKYLFSYVSGAPSIKPIFLERRAPAEILNSLCV
RAGEWLSLRAADAWRPAKSPCKVFQGYRVYLDGTDTFRQQFGAVVMAEMETARNSPAQKR
RRLSLAASISQPACDLVISDKAHPLTCHADLRDLLRQARRLAIPVKPLDWMYAALMSGRL
PDPIQIQAPSEEPSSAPGPQAAPDATRNSSPDGGAAGAQEAAQQAEATHADEGELVEDSE
SFGEMPLEIRPSAASVSFGGAAAAGLRSPRRAARVQPRQCDRPVPNPRNPAAAARRLSAA
AAELAWVGDASKVPPAGLSMQASQHRKFYGAIARGSELMAVGDDVEVEVLGEQLPRVARI
EALWSERPVDGTERMLARCRFYYRPQETMFMSSGKPDELFASDHVEQRVSASTLLRKCTV
VSGHPSNRTAMLDRRASLGPQSYFCMYHYDYQGEALKPDEWVQVDSSREEDDLEAGAQMP
TAELAWVGESSKEPPAGMSMHASQHRNFYGAGEEVMAVGDDVEMEVSGEQLPRVARTEAL
WSERPETTFLSSSKSEELFASDHVEQRVAASALLRKCTVVTGHPGDMAAIMNRCASLAEL
SLGSHSYFCMYTYDHQGESLL
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagccaagacagcgagagcctccagcgtcctgctctgcaggagaatgcattccag
cccctgctgactccaggcggcccgttggccctcagcccccctcgcactctcagatcttcc
caaaaatggggatctctgtctgcttcacgcatcctgggtttgtccccaaatggttcccgc
ctgcgaggcaagtccctggtgctgtcacccatgtgctcccgggcagctccagcctctcaa
ggccacccaccacagacaggtgtggaaggtgcgcagccgagagagcagttgcaggactcc
agttcgcatgactttgtgccgccagcaggggcagcgccaccgggccgcatgtgccacagt
cagccctgcccgctcagcaggccctggccagatgacagcgggagggcagagaaccccagc
acgccagccagaagaacagagacccctgatctgggcagccctgggaaggacagggcggtg
cttgtcgagctggatgcaagcggtgccggggcagggacagcgatgggtgaatgtgatggg
aggcatgcggatgtcaggcctgcgaaggaccagccaggaggctcagagctgccctcttct
gctgagccaggtcttcagtcgagggagcaggcagatgatcatatactggcaccggcgagg
caccacagcaatgctgcagcagcagatgcagcccttgcagctccagggacaggagatatg
ggagctgcaggcagcatgggcccatcccagatgggaggcacccttgacagtggctacagc
ttgcagctgaacctgtctttgggcagccaggacgatcgcatccttcccactgaggtggag
ccaaggagcacagaggtgactgccaggcaggtgctggccacggagatgcagctcactggt
ggcttcttttctgaaacccaggtggaagctgcgctcccggcaggagacatatgcgtgccc
ttgccggcagagctagccgccaaccccggcacttcagcggaacatcccgccttctgtcca
gagactcagatcctggattgctccacccctccgccagctcctctcagtgcgtctactccg
gcagcccagctggtagctccacccactcagcagaagagtgacattgctgaggcgctgcct
gcgcaacaggctgctgccacggaggtgcagctggagtctgggctagccattgcagcaggt
gataacacaccagcagaggcgccacaggtcagcggagcgcttgcttgcagtgcagcagca
caggacaggcaagagcacttgccagtgcctgtgagccctgagcctgctgctgctgtagcc
actgcgaatggagccatcccggtccagcccaggctagaggtcaggctagaggtcatggct
gaacagacatacagtcctcaaatgggagccagggagcaggcacacggacaaactttgctc
gagacaccagagccatcaacgggaggggcgtgcccagccaggacgcctgccagcagaggg
cccaccatgagcctgggactgctgtcagaggacttcatctcagagtcagaaggcacccag
cgcgcagtgatggcagccaagatcattgacgagtacaacctcaagtttcatcgtggtgtt
tctgatggcgcggtattcaacttcgttctgacgacagacatggagaccgttgccgcatgc
atagccacgaagcctgcgctcataccagctgaggagtattcaatgtgggagaggcggctg
gtggaggcaaggagggatcaggaaatgctggattgggatgtggaggggactggagagcca
ggaattacagaggagctgggtgggctcacgcaggaggctgttgcactgctgtgcacagag
gatgagatcgccagtcgccgggaggagctgggggcgacagggagagtcaagaaaagggag
ctgactcgtgagcccgtgcaggtcatgaaatcaattacagcggaggccttttgctcagca
tcggaagctcagcccagcagtgccgccaactctgaaagccaatgtcagcttccacctcca
ctgccacctcgtcccgaaaacaacagcacaggcggacagctgcacacaagcagcttcctg
gtgaacagctctgttgccgctgctgggagcgtggcgactggcagtgcagcggagcttagg
attgaggctgttgatcttccactcagcgagcgcgacgtgaatgaagctgtccaaggggtg
atggacagtctcctggcagcggtgatccagcctccagctgctctctgcgaccatgcttct
ggctatgcagcagcagcagacgagcctgatgcagcagcggagccagacgccagctgtgct
gccatggatattgacactggggagggcggcggcgcgcacgcagctgaacagcctaaagaa
gcagcccttgagcctgcccctaaggcacagcagcaggcggccgcagcagctgtggcggca
gtgccggcacgcgagcatgcgccagcaggggccgcagatgatgaggatgacttttcctcg
ctcccgctgatgctgcttctggacacgcagtacccagagtcccagcggcttgctgcagcg
gcgcagctatccgacaacgccctggataggacagcaagtggccaggcggcagaagcacat
gcacttcctgcctctgtgccggagagcgatgccgtgcagttccagcacagagagccctcg
gctgcagccggggcaccagaagcagaggcggctgtgtctgccgggccaagccaggcagca
aagggcccatccgctcgctcccaggatgacgtctggggcacaatcttgtcgaccaacaca
cagcccagcggcagtgggccgcctgcgcacaagactcctgcgtggcaggccagttcgggc
cttgctgtcggcattggtggtaagcagccgaatcagtcgcagccaagcccaggcagccgc
ggctggcagcgagaggtgggcagcaccggcctgcgtctgaggccggtctgggggttggcg
ccagcttcccgggaggcaacgcccctgaccggagacagcctgctcacgccccccaagcgc
gtcgtggggcccccctccgccgaggccgcacgcactggcggcctgcccggctctcccgag
acgccgtcacagatcgcggccaccgcggacgtcctgcagctgtacagccgcccgcagcag
gacatccgcacgcccgggtcgggagacaagcggcagcggccctgcgcgcgcgagagccct
gagagctcgggcatcgagccaacacgcaaaccggacgtgggcggtcacgccgaggcaggc
ggtgcatctgagcacgtgccggcagcggcgggggcgtcgccgctgtcatccgagccaccg
ggctcctttgttccggacacatacccgggcatcggagcaaacacaggttcccctgcgcac
cctgccgaccacggcacagcggaggagcatgcagttgcgcaggagcacgtggacgagtgc
ctgcaggatgacagagcggcagaagtgccgccgccaaaacgaaggcggctgtcgctggag
ggcggcaggggccagaagggctctgatcacttgcaggctcgtgcggcacaggctggcggc
aaggactcgcccaggaaggggctgcacgccatgggcgctcatccgcgcggcatgcgagcg
gcaggagctatgcctgtcacccgagcgctggccagcgagatcggcagagatgcagcgcca
agaatgaccaggcagcaggcgcaggtggccaagcagcagaggaagggcgcgctggtgagg
gctggagttctgcggcgtgcagggcagatcagacagcccgttagaccgtcttctgctggc
aggcggtgggccggcacatttgggaagctgcctgcacagcctgcgcagccgaccctgaaa
cgcagacgcactgccacccccggtggcgaggcgagggttgatggaaggcagctggaggac
aggaaggctcatgcagctgagcaggatgaggaagtgagttcacctgagcccgagctggca
ggtcaggatacagaagcgcgcggaaagcaggcagatgtgcggcttggtgtgacatcagcc
actgcactgccggtcgtgaggagagcagagcagcagcagcagggtctgccgggcggcttg
cgttctggcaaactcagagacccttacagctttcctgagagccaagatgtccggctggag
aacccagccaggagcagggcaggcctggcccctcgagttcattttgctcacatctcacgg
cgctcacacgctcaggcccagccgccagtgaaaggactggctggctcaactctgcagcat
gggacaaggagggatgctgcgcaggatgctgtggacaccagcagaggggttcgaacaagg
aggactggtgtggaggccagaaacgctgacccagagcctgcgggctgccacgagaggccg
cagcgcgcaaaacgccagccgttgaggctggaggactaccagcagggaacgctggcacaa
gccacccagcctgtgcgcgtgtcccccctgcgggccggccggaaggggggcgccggggag
gaagcttccgggaaggcggcgggcggtccccggcgccaactggtgagcttcagggagctt
gagaggcggcagcagatgagagcagccgtatgcgcaccgccagaggatcaaggggttgag
gagagtggagacagtggcgctgtgtctgcacgggcaaatggcgatgacgagccaatcatg
caattggcagaggctgcaagcgaagacatggcagaatctgcgcagcctgccgagcaggaa
gcagctgagtgtgcatcaagcggcagggctgcagagcagcaggagcctgtgcataaagct
gtggagaagccgcctggtccccagaagctgggctgctcaaagtgcaggcactccaagaac
ggctgccgcgcatgccgacctgccgctgcaggggctgcttccccagctgcatcccccaag
agggtgccgccacagaagcgcaagcgcagagcatcgctgccagaagagccacccagtctt
caggacaactctgctggggcgcagcacagaaggcaatctgcagccaggcgcaaatccgag
cctgccgcagtctttgatgccaaatccggcgcatttggcgggaaggctttcctggtgaca
ggctttaaggatgccagggagcggcgccgcatcaccaagctcatcacagaccatggtggc
agtgtcattgacagcatccctttgcccgaggagcagaagacagtgcatggcgtggtggct
ggcagggcgtgcgacaggcgaaccaaatacctcttctcctacgtgtctggcgccccatcc
atcaagccaattttcttggagaggcgcgcaccggctgagatcctgaattcattgtgtgtg
agggccggcgagtggctgtcgctgcgagctgcggatgcatggcggcccgctaaatccccc
tgcaaggtgtttcagggctaccgggtgtacctggacggcactgacaccttcaggcagcag
ttcggggcagtggttatggccgagatggaaacagcgcgaaacagccccgcacagaagcga
cggcggctgtcgctcgctgccagcatcagccagccggcctgcgacctcgtcatctctgac
aaggcacatccgctgacctgccacgcagacctgcgtgacctcctgcgccaggcgcggcgg
ctggcaataccagtgaagccgctggactggatgtatgcagcgctgatgagcgggcgcctg
ccagaccccattcagatccaggcgccctcagaggagcccagcagcgcgcccggtccccag
gccgcaccggatgcgacgcgaaacagcagcccagatggtggtgctgcgggggcacaggag
gcggcgcagcaggcagaggccacacatgccgacgagggggaactggttgaagacagcgag
tcatttggggaaatgcctctggagatccgcccctctgctgccagcgtcagctttggaggt
gcagctgctgcaggtctaaggagcccgcgaagagccgcgcgagtgcagccacgtcagtgt
gatcggccagtgcccaaccccagaaatccggctgctgccgccaggagactgtcagctgct
gcagctgagctggcctgggtaggggatgccagcaaggttcccccagcaggcctcagcatg
caagcctcccagcacaggaaattctatggcgccattgccaggggttcggaactgatggcg
gtgggcgatgacgtggaggttgaggtgctgggagagcagctgccgcgggtggcgcgcatc
gaagcgctgtggagtgagcggccggtggatggcactgagcgcatgctagcgcgctgccgc
ttctactatcgccctcaggagaccatgttcatgagcagcggcaagccggatgagctgttt
gcatctgatcatgtggagcagcgggtgtctgcctcaaccctgctgcggaagtgcacggtg
gtttccggccacccgagcaacagaacagccatgttggaccggcgcgccagcttaggaccg
cagagctacttctgcatgtaccattatgactaccagggcgaggccctgaagcctgatgag
tgggtgcaagtggattccagcagagaggaagatgatttggaagctggcgcccaaatgccg
actgctgagctggcctgggtgggggagtccagcaaggaacctcctgcaggcatgagcatg
cacgcctcccagcacaggaacttttatggcgccggcgaagaagtgatggctgtgggggac
gacgtggagatggaagtgtcgggtgagcagctgccgagggtggcgcgcactgaggcgctg
tggagtgagcggccagagaccaccttcttgagcagcagcaagtcagaggagctgtttgcc
tctgatcatgtggagcaacgggtggctgcctcagcactgctgcgcaagtgcacagtcgtg
accggccaccccggcgatatggcggccatcatgaaccgctgtgccagcctggctgagctg
agcttgggatcacacagctacttctgcatgtacacctatgaccaccagggcgagagcttg
ctctag
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