KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_59312
Entry
COCSUDRAFT_59312  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K20131  Rab5 GDP/GTP exchange factor
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csl04131]
    COCSUDRAFT_59312
Membrane trafficking [BR:csl04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    COCSUDRAFT_59312
 Protein recycling
   Other Rab GTPase associated proteins
    COCSUDRAFT_59312
SSDB
Motif
Pfam: VPS9
Other DBs
NCBI-GeneID: 17044814
NCBI-ProteinID: XP_005651348
JGI: 59312
UniProt: I0Z835
LinkDB
AA seq 850 aa
MKEPAAADLVRSIKNFIKTFEDRKPDPERDSAFVQGLEKYLMTKIYHKTFGVSELDRERD
EALHVRMRALNFIKPSHLDIPELYRDEKAWILAMKELHKINNYKAPRDKLVCILNCCRVI
NNLLHVQVQQGEARGADDFLPVLIYVVIHANPPQLASNLEYIQRFRMHSRMASESAYFFT
QLYSAASFIETVNATSLSMDPDEFMARMMAAGVPDMQLAPSQDGAINTAPPPEKPPAFET
APPTPEATTAPLPPENAGGLPADQLLMGAAPLTPTVPLPAVTAAGMLLPMHSAPIGGGQA
VVPDAGTLLPNAAPAQFVAPAVPSPGATALADQGGAALQGGADIWGRAPTVEELERAGVS
LVLEAEAAGRLKQDHRFLYAAAGDLLITDIPELLSSYKELVLRYESLSLAVAAVAAGSAA
LPAATHPQIGAHQAGLPVPQTAFAHLLSGGHPAAHSQAAAVAQLPVGRPLETAPTPGTAL
ALDEASETAQDAAEKVLKPSTSAGLYDDPRLQLPDQAGPPSASTAGDLPASAAAPLHANE
AGSERGGKAVEAEFVQAMALQDDDRFLSLATGEAQADAEDVGTPDAGATAAADFSAAGGH
MQLPTLQEVNDPITGQEAGKDAEQGDHPASHEEDDDVEEVDVPGVSDEDRAGSHEAAAEE
PTAATQPQWEAGGAAEHPSSAGEPIGDFVPGLGGIQSRMSISSTAATVGDRASMDISRLD
SNPAGSSSVKSDAGASSVAATEPAESPGRAPDAAGFPSANQRTHSRAFDEGVPATSSDGD
PFYATDLALKVSTAQTEKLAGSAGSPKQLALAENNKHDAADAAADDLFGGLSVAHAPAEG
QHEPASTSLI
NT seq 2553 nt   +upstreamnt  +downstreamnt
atgaaagaacctgcggccgcagacctcgtcaggagtataaagaacttcataaagacattc
gaagaccgtaaaccagatcccgagcgggacagcgcatttgtccagggtctggagaagtat
ctgatgacgaagatataccacaagacgtttggggtgagtgagctggacagggagcgagat
gaggccctgcatgtgcgcatgcgagccctgaacttcatcaagccatcgcacctggacatc
cctgagctctacagggatgagaaggcctggatccttgccatgaaggagctgcacaaaatc
aacaattacaaggcgcctcgtgataagctggtgtgcatcctcaattgctgccgggtcatc
aacaacctgctgcatgtccaagtgcagcaaggggaggctcgaggtgctgatgacttcctg
ccagtgctcatctacgtagtgattcatgccaaccctcctcagctagcctccaacctggag
tacatccagcgcttccgcatgcactcgcgcatggcctctgagtcagcctacttcttcacg
cagctgtactctgcggcgtccttcatagagacggtgaacgcgacatcgctgtcgatggac
ccggacgagttcatggcgcgcatgatggcggccggcgtccccgacatgcagctggcaccc
agccaggacggcgcgatcaacactgctccgccgcccgaaaaaccacccgccttcgaaacc
gcaccacccaccccggaggccaccaccgctcctttgcccccggagaatgccgggggcctc
ccagcggaccagctgctgatgggggccgcgccgctgaccccaactgtgccgctgccggcg
gtgacggctgccggcatgctgctgccgatgcacagcgcgccgattggtggcgggcaggca
gtggtgcccgatgcgggcacgctgctgcccaatgcggcccccgctcagttcgtcgctccg
gcggtgccgtctccaggtgcgaccgcgctggcggaccagggcggcgcagcgctgcaaggg
ggtgcggacatctgggggagggctccgacagtggaggagctggagagggcaggagtcagc
ctcgtgctggaggcggaggctgccggtcgcctgaagcaggaccatcgattcctctatgcg
gccgcaggggacctgctcatcaccgacattcccgagctgctctcttcctacaaggagctg
gtcttgcgctatgagtccctgtcactggcggtggctgccgtggcggctgggtcggccgcg
ctgcctgccgccacgcatccgcagatcggcgcgcaccaggcggggttgccagtgcctcag
acggctttcgcccaccttctctcaggcggccacccagccgcccactcgcaggcggcggct
gttgcgcagctgcctgtgggaaggcccctggagacagcgcccacgccgggcacggccctg
gcgctggacgaagcttccgagacggcgcaggatgcggctgagaaagtcctcaagccgagc
acctccgctggcctctatgatgatccacgcctgcagctgccggaccaggctggcccgccc
tctgccagcacagccggggacctgccggcctctgctgccgcgcccctgcatgccaatgag
gcgggcagtgaaaggggaggcaaagccgtcgaggcagaattcgtgcaggcgatggcgctg
caggacgacgatcggttcctctccctagccaccggggaggcgcaggccgacgcggaggac
gtgggcactcccgacgcgggtgccaccgctgcggccgatttctcagcggcgggtggtcac
atgcagctgcccacgctgcaggaggtcaacgaccccatcaccggccaggaagctggcaag
gacgctgagcagggggaccacccagccagtcacgaggaggatgatgatgttgaggaggtg
gacgttcctggtgtgagcgatgaggacagggccggctctcacgaggcggcggcagaggag
ccgacagcagcaacgcagccgcagtgggaagcgggaggtgcagctgagcatcccagctcg
gcaggggagcccattggggactttgtgcccgggctcggagggatccagtcccggatgagc
atctcttccacggcagccacggtgggcgacagggcgtccatggacatcagccgcctggac
tccaacccggccggctcctcctcagtcaaatcagacgcaggcgcgagctccgtagcggca
acagagcctgccgagagtcccggccgggcgcctgacgcggcgggattcccttcagccaat
cagaggacacacagcagagcctttgatgagggcgtgccagccacctccagcgatggagac
ccgttctatgccaccgaccttgcacttaaagtcagcacagcccagacagagaaattagcg
ggatcagccggatctccaaagcagctggcactggcggaaaacaacaagcatgatgcagcg
gatgccgcagcagatgatctgtttgggggcttgagtgttgcgcatgcgcctgctgagggc
caacatgagcctgcctccacatcgctcatctag

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