Coccomyxa subellipsoidea: COCSUDRAFT_59812
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Entry
COCSUDRAFT_59812 CDS
T02914
Name
(RefSeq) ribosomal protein S5 domain 2-like protein
KO
K12587
exosome complex component MTR3
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCSUDRAFT_59812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_59812
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
COCSUDRAFT_59812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
17036835
NCBI-ProteinID:
XP_005643429
JGI:
59812
UniProt:
I0YKG6
LinkDB
All DBs
AA seq
195 aa
AA seq
DB search
MKPGTLSQAAGSAYAEFGNTKVIAGVYGPREAERKEVFSTEGRLQCDNDEERELSVQLQT
ALEAAVRLQTFPKANVDIYCLVLESAGADLAVCICAASLALADAGIEMEDMVSACSVSRV
DGHLLLDPTIDEAYREDGSALLAMMPSANAVSQVVLTGQWSNAQASEVLQLCMGGCAQID
AYMRQSIKEAAAGQV
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagggaccctgagccaagcggctggctcggcttatgcagagtttggaaacacc
aaggtcatcgctggagtgtatggcccgagggaggccgagaggaaggaggtcttcagcaca
gaggggaggctgcagtgcgataatgatgaggagcgggagctgtccgtccagctccagaca
gcgctggaagcagcagtgcggttgcagacattccccaaggccaatgtggacatctactgc
ctagtgttggagtctgcaggagcggatctggcagtatgcatatgcgcagcctcgcttgca
cttgcagatgcaggcattgagatggaagacatggtgtcagcatgcagcgtgagtcgggtg
gatgggcacctgctgttggaccccaccattgacgaggcatacagggaagacggcagcgct
ctgcttgccatgatgccatcagccaatgcggtgtcacaggttgtgctgactgggcagtgg
agcaatgcacaggccagcgaggtgctgcagctgtgcatgggcgggtgtgcgcagatagat
gcctacatgcggcagtccataaaggaagctgcagcaggacaagtgtga
DBGET
integrated database retrieval system
