Coccomyxa subellipsoidea: COCSUDRAFT_61488 Help Entry COCSUDRAFT_61488  CDS       T02914                                  Name (RefSeq) ARM repeat-containing protein   KO K12882   nuclear cap-binding protein subunit 1 Organism csl  Coccomyxa subellipsoidea Pathway csl03013   Nucleocytoplasmic transport csl03015   mRNA surveillance pathway csl03040   Spliceosome Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     COCSUDRAFT_61488   09122 Translation    03013 Nucleocytoplasmic transport     COCSUDRAFT_61488    03015 mRNA surveillance pathway     COCSUDRAFT_61488  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csl03019]     COCSUDRAFT_61488    03041 Spliceosome [BR:csl03041]     COCSUDRAFT_61488 Messenger RNA biogenesis [BR:csl03019]  Eukaryotic type   mRNA processing factors    5' end processing     Cap binding complex      COCSUDRAFT_61488 Spliceosome [BR:csl03041]  Common components   Common spliceosomal components    Cap binding complex     COCSUDRAFT_61488 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MIF4G_like MIF4G_like_2 MIF4G Motif Other DBs NCBI-GeneID:  17043259 NCBI-ProteinID:  XP_005649801 JGI:  61488 UniProt:  I0Z3N8 LinkDB All DBs AA seq 887 aa AA seqDB search MTDDLIGSSTEKGTDAIVVLRMQGEDTLIVLTLRVNTNGVGAPSTEDDLEQLYRSLRRDL HYNGDLVRNIIIDCAVELSPKTAVYATLVGLLNTDDQDFTTDLIQSANEQFNVVLAAGDK NRARLLLRFFAALVVANVLHASSVLAALLSVVDAASAIASAGGGGDSGRLWQPYTDYLVY AALMALPWGGAELAESAPSDLERLFGGVEAYMAARPRASQPALRPFLRPKDADDIPAQSD SGGASFLGQVWEAVQELRSGGKWSVDAIRQVAPAFEAKLAAGQPHDLPALTVPPTPPGVS GTAAPMEAAASVLELFPPRGIIRLLPAEHTELGTLKVERLVAEEYILDTIHFFEADRVEC ARRLAKGLQLPGKHESLLAEMLFSQMLRVPQPQLKPLAYSTLMVDVCKLMATFPRSMSAC VRECFARMDVMDPELRMRLADWLAYHLSNFEFMWPWDKWKHVLDMPPHNSQRRFVVATLS KLVRLSYRSRIQSVIPPAFVPLLAADNDVLPLPGPPELAPDADVDGAHEDERDAETVRAY QLLQMVRHKVVSEGVLEWVEEEQLRQELGGGLGVLRMLLRGYLVAGAKSFTHMITALERY CTTLQALLHETGHEARSPASTSFVCNNSGGILQGEVALVDVTAKVWANAPQRAAQVIDRL MALRLVSGAAIVAWVFGCPGVRTLADELSTGLAWEVFYNAVNKMLARTQDARDDLSEAQA ESDAAGARAREAAEAFSRAGEGEDTPQDLAERLAQEEAAAGSVLAETQAQVEGRQADLDE AVQLQEALLLQVFTNFRDILLEGHAELGASAAEPASGEEPDPSAIGATEQQDAKHAWYAF MLATLQSFTRRYYKAVASIAGQVEDDLFQGDAVPEDVRTAIVESLHL NT seq 2664 nt NT seq  +upstreamnt  +downstreamnt atgacagacgatttgatagggagctcaacggagaagggaaccgacgccatagtggtcctc cgaatgcaaggggaggatactctgatcgtcctaactctgcgggtcaacacaaacggcgtg ggggctccatcaacagaggacgatctggaacaactatacaggagtctgaggagggatctg cattacaatggggacctggtcagaaacatcatcattgactgtgccgtggagctgtcgcca aagactgctgtgtatgcaactctggttggtctccttaacacagatgatcaggatttcacg acagatctgatccaatctgccaatgagcagttcaatgtggtgttggccgctggcgacaag aatcgcgccaggctactgctgcgattctttgcagcgctggttgtggccaacgttctgcat gcatcctctgttctggcagcccttttgtccgtcgtggatgctgccagcgccattgcttct gccggtggcggcggggacagcggacgtctgtggcagccatacacggactaccttgtgtac gcggccctcatggccctgccttggggcggcgctgagctggcggagagcgcacccagcgac ctggagcgcctgttcgggggcgtcgaggcgtacatggcagcccggccgcgtgcctcgcag ccggcgctgcgcccttttctgcggcccaaagacgccgatgacatcccggcgcagtccgac agcggcggcgccagcttcctcggccaggtgtgggaggccgttcaggagctgcgcagcggc gggaagtggtcggtggatgccatccgccaggtggcgcccgcgttcgaggccaagctggcc gccggacagccgcacgacctgcccgcgctcaccgtgccccccacaccgccaggcgtgtct ggaaccgccgcccccatggaggctgcggcgtcggtgttggagctgtttccgccccgaggc atcatccggctgcttccagcagagcacacggagctggggacactgaaagtggagcggctg gtggcagaggagtatatattggacaccattcacttctttgaggccgaccgggtggaatgc gcccgccgcctggccaaaggcctgcagctgcccggcaagcacgagtcgctgctggctgag atgctgttctcccagatgctgagggtgccccagccgcagctgaagcccctggcatactcc accctcatggtggatgtgtgcaagctgatggcgacattccctcgctccatgagtgcgtgc gtgcgcgagtgctttgcgcgcatggatgtgatggacccggagctgcgcatgcgcctggcc gactggctggcctaccacctgtccaactttgagttcatgtggccctgggacaagtggaag cacgtcctggacatgcccccccacaacagccagaggcgttttgtggtggcgacgctgtca aagctggtgcggctgtcgtaccggtcacgcatccagagcgtcatcccgccggcctttgtg ccgctgctggccgccgacaatgacgtgctgccgctgccggggccgcctgagctcgcgccc gatgccgacgtcgacggcgcccacgaagatgagcgcgatgctgagaccgtccgagcctac cagctgctgcagatggtgcggcacaaggtggtgagcgagggggtgctggagtgggtggag gaggagcagctgcggcaggagctgggcggcggactgggagtgctgcgcatgctgctgcgt gggtacctggtcgcgggcgccaagtccttcacgcacatgatcaccgccctggagcgctac tgcaccaccctgcaggccctcctgcacgagaccggccacgaggcgcgctcccctgcctca acttcatttgtttgcaataatagcggggggatccttcagggggaggtggcgttggtggac gtgacggcaaaggtgtgggccaacgcgccgcagcgggcggcgcaggtgatcgaccggctg atggcgctgcggctggtgagcggcgcggccatcgtggcctgggtcttcggctgccccggc gtgcgcactctcgctgacgagctctccacgggcctcgcctgggaagtcttctacaacgcc gtcaacaaaatgctcgcccgcacccaggacgcccgggacgatctgtcggaggcgcaggcg gagtcggacgcggcgggggcgcgcgctcgggaggcggccgaggccttcagccgcgccgga gagggggaggacacgccgcaagaccttgctgagcgcctggcgcaggaggaagccgccgcc ggcagtgtccttgccgaaacgcaggcccaggtggaaggcaggcaggcggatctggatgaa gctgtgcagctgcaggaggccctgctgctccaagtcttcaccaacttcagggacatccta ttggaaggacacgccgagctgggagcctctgcagctgagcctgcaagtggagaagagcct gacccatcagccataggagcgacggagcagcaggatgcaaagcacgcatggtatgcattc atgctggcaactctgcagtccttcacaaggaggtactacaaggcggtggcgtccatagcc ggtcaggtggaagatgacctcttccaaggcgatgcagtgccggaggatgttcgcacagcc attgtggagagcctgcacctttaa

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