KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_61728
Entry
COCSUDRAFT_61728  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K11093  U1 small nuclear ribonucleoprotein 70kDa
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_61728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_61728
Spliceosome [BR:csl03041]
 Complex A
  U1 snRNP components
   U1 snRNP specific factors
    COCSUDRAFT_61728
 Complex B
    COCSUDRAFT_61728
SSDB
Motif
Pfam: RRM_1 U1snRNP70_N RRM_7 RRM_8
Other DBs
NCBI-GeneID: 17043524
NCBI-ProteinID: XP_005650066
JGI: 61728
UniProt: I0Z4F3
LinkDB
AA seq 443 aa
MDSKAASAQGNPALANKLEAERKLKEGISGHKTGLPKKLLELFEPLPPPARLTDIPKRPP
KLPYLGIAQHVALFAEPGDEEYEPPPEVPRPPSPRRFRNPEMTAQARVDYETKAEKKTRV
STQKIAGAKESIEEGLKIWDPAKDPLAEGDPFKTLFVARVSYDATEKKLKREFEEYGPVK
RVRLVTQKDSGKPRGYAFVEFEHKNDMKTAYKMADGRKIEGRRVVVDVERGRTVPNWRPR
RLGGGKGGESREPKAPKDPSKRGLPAALPSIAALPPPPSADRDRDRERDREREKEREKER
EKEKDRERERAKERGPERSRERDRERERDVVGTPREKERERDRTRDARPEKEREGRDRDR
KREREEGERERDHDRKRERRDENGGDRRHDKVKEEREEGEHRSSRRKDPEKREDGERKRD
HDDKDRHRDRDDSIGLVQKTAQR
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggactccaaagcggcgtcagcacaagggaatccggcgctggcgaacaagctggaggcg
gagcgcaagctcaaggaggggatttccgggcacaaaacaggcctgcccaagaagctgctg
gagctctttgagccactgccgccccccgcccgcctcactgacatccccaagcgcccgcca
aagctgccctaccttggcatcgctcagcatgtggccctctttgcggagcccggggacgaa
gagtatgagccgccgccggaggtgccccggccgccgtcgccgcgccggttccgcaacccg
gagatgacagcacaggccagagtggactatgaaacaaaggcagagaagaagaccagagtg
tcgactcagaagatagcaggagcaaaggagagcatagaggagggcctgaagatctgggac
ccagcaaaggaccctttggcggagggggaccctttcaaaactctctttgtggcacgagtc
agctatgatgcaacagagaagaagttgaaacgggagtttgaggagtacggcccagtcaag
cgcgtgcgcttggtcacacagaaggactcagggaagccgcgtggctatgcattcgtagag
tttgagcacaaaaacgatatgaagacagcgtacaagatggctgacggccgcaaaattgag
ggccggcgggttgtggtggatgtggagaggggccgaactgtacccaactggcggccccgg
aggctgggtggtggcaagggtggggagagccgggagcccaaggcacccaaggacccctca
aagagggggctccccgccgcattgcccagcatcgctgcgctgccgccgccaccttccgcc
gacagagaccgcgacagggagcgggaccgcgagcgcgagaaggagcgagaaaaggagcgg
gagaaggagaaggatagggagagggaacgcgcaaaggagcgcggcccggagaggagcaga
gagcgcgatcgcgaacgcgagcgcgatgtggtgggcacgccgcgcgagaaagagcgcgag
agagaccgcaccagggatgccaggccagagaaggagcgcgagggccgggacagggacagg
aagcgtgagagggaggagggcgagcgcgaaagggaccacgacagaaagcgcgagcgccga
gatgagaacggcggcgaccgcaggcatgacaaggtgaaggaggagagagaggagggggag
cacaggagctccaggcgcaaggatccggagaagcgcgaggacggcgagaggaagcgcgac
cacgatgacaaggaccgccaccgtgatcgtgatgacagcattgggctcgtgcagaagaca
gcgcagcgctga

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