Coccomyxa subellipsoidea: COCSUDRAFT_61728
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Entry
COCSUDRAFT_61728 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSUDRAFT_61728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_61728
Spliceosome [BR:
csl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
COCSUDRAFT_61728
Complex B
COCSUDRAFT_61728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
17043524
NCBI-ProteinID:
XP_005650066
JGI:
61728
UniProt:
I0Z4F3
LinkDB
All DBs
AA seq
443 aa
AA seq
DB search
MDSKAASAQGNPALANKLEAERKLKEGISGHKTGLPKKLLELFEPLPPPARLTDIPKRPP
KLPYLGIAQHVALFAEPGDEEYEPPPEVPRPPSPRRFRNPEMTAQARVDYETKAEKKTRV
STQKIAGAKESIEEGLKIWDPAKDPLAEGDPFKTLFVARVSYDATEKKLKREFEEYGPVK
RVRLVTQKDSGKPRGYAFVEFEHKNDMKTAYKMADGRKIEGRRVVVDVERGRTVPNWRPR
RLGGGKGGESREPKAPKDPSKRGLPAALPSIAALPPPPSADRDRDRERDREREKEREKER
EKEKDRERERAKERGPERSRERDRERERDVVGTPREKERERDRTRDARPEKEREGRDRDR
KREREEGERERDHDRKRERRDENGGDRRHDKVKEEREEGEHRSSRRKDPEKREDGERKRD
HDDKDRHRDRDDSIGLVQKTAQR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggactccaaagcggcgtcagcacaagggaatccggcgctggcgaacaagctggaggcg
gagcgcaagctcaaggaggggatttccgggcacaaaacaggcctgcccaagaagctgctg
gagctctttgagccactgccgccccccgcccgcctcactgacatccccaagcgcccgcca
aagctgccctaccttggcatcgctcagcatgtggccctctttgcggagcccggggacgaa
gagtatgagccgccgccggaggtgccccggccgccgtcgccgcgccggttccgcaacccg
gagatgacagcacaggccagagtggactatgaaacaaaggcagagaagaagaccagagtg
tcgactcagaagatagcaggagcaaaggagagcatagaggagggcctgaagatctgggac
ccagcaaaggaccctttggcggagggggaccctttcaaaactctctttgtggcacgagtc
agctatgatgcaacagagaagaagttgaaacgggagtttgaggagtacggcccagtcaag
cgcgtgcgcttggtcacacagaaggactcagggaagccgcgtggctatgcattcgtagag
tttgagcacaaaaacgatatgaagacagcgtacaagatggctgacggccgcaaaattgag
ggccggcgggttgtggtggatgtggagaggggccgaactgtacccaactggcggccccgg
aggctgggtggtggcaagggtggggagagccgggagcccaaggcacccaaggacccctca
aagagggggctccccgccgcattgcccagcatcgctgcgctgccgccgccaccttccgcc
gacagagaccgcgacagggagcgggaccgcgagcgcgagaaggagcgagaaaaggagcgg
gagaaggagaaggatagggagagggaacgcgcaaaggagcgcggcccggagaggagcaga
gagcgcgatcgcgaacgcgagcgcgatgtggtgggcacgccgcgcgagaaagagcgcgag
agagaccgcaccagggatgccaggccagagaaggagcgcgagggccgggacagggacagg
aagcgtgagagggaggagggcgagcgcgaaagggaccacgacagaaagcgcgagcgccga
gatgagaacggcggcgaccgcaggcatgacaaggtgaaggaggagagagaggagggggag
cacaggagctccaggcgcaaggatccggagaagcgcgaggacggcgagaggaagcgcgac
cacgatgacaaggaccgccaccgtgatcgtgatgacagcattgggctcgtgcagaagaca
gcgcagcgctga
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