KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_63221
Entry
COCSUDRAFT_63221  CDS       T02914                                 
Name
(RefSeq) DNA polymerase epsilon, subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03030  DNA replication
csl03410  Base excision repair
csl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCSUDRAFT_63221
   03410 Base excision repair
    COCSUDRAFT_63221
   03420 Nucleotide excision repair
    COCSUDRAFT_63221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csl03032]
    COCSUDRAFT_63221
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_63221
Enzymes [BR:csl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     COCSUDRAFT_63221
DNA replication proteins [BR:csl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    COCSUDRAFT_63221
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      COCSUDRAFT_63221
SSDB
Motif
Pfam: DNA_pol_E_B
Other DBs
NCBI-GeneID: 17041687
NCBI-ProteinID: XP_005648239
JGI: 63221
UniProt: I0YZ76
LinkDB
AA seq 557 aa
MASIKRAVQSAFLDAGLTLEKEALNAFVTFVEDNNGGEDLVYQLLDACTKACASSTKLTA
AQAQTVIGSLCGSGEKTDPVQVISAFDTPKLRYDPIRKVFYQIQGRPTLHGSSEEKVQMY
LDRMYLLLQRLKRNRNFSRPAFAGIKADSRDFVELTELKALLGCVGQVKFVMGCISQLTD
GRYFLEDMSDSLPIDLSDAQTTSGFFTENCIVVAEGVLQHSGVFKVRALGFPPVELRSES
RLAAKNLDFFGGSTPSEDEQLAAAAALAEDEADRIVVLSDLWLDKPATLDRLRVVLEGFE
GLERVPSMFVLLGNFQSFSCNAASTDYAALKDNFGALAGTLASFPRIRAESRLVFVPGLG
DAGPGAILPRPPLPESLIGALREQLPTALFTSNPCRIRHFNQACPNNPLLSLLCHSTTTN
LSTEIVVFRDNLQNRMRKLCLLAPNDEGTGAEASSDAAFEHLCATLLQQSHLCPVPLEAQ
PVYWSYDHALSLYPLPDALILADPAPCASFAFPPLPPDQRGAACVCLNPGSFANGTFAAY
CPATREVELCDVPEEED
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggcatccataaagagggctgtccaaagtgcattccttgatgccgggctgaccctggag
aaggaagccctcaacgccttcgtgacatttgtggaggacaacaatggtggagaggacctc
gtttaccaactgctagatgcatgcacaaaagcatgcgcgtcgtccaccaagctcacagcc
gctcaggcccagacagtgataggcagcctgtgcggcagcggagagaagacagatcctgtg
caggtcatcagcgcctttgacacacccaagctgcgctatgaccccatccgcaaggtcttc
taccagatccagggccggcccaccctgcatggctcctccgaggagaaggtgcagatgtat
ctggacagaatgtacctgctgctgcagcgcctcaagcgcaacagaaatttctcgcggccg
gcctttgccggcatcaaggccgactcccgagactttgtggagctgacggagctgaaggcg
ctgctgggctgcgtggggcaggtcaagtttgtgatgggctgcatctcccagctgaccgac
ggccgctacttcctggaggacatgtccgactcgctccccatcgacctctccgacgcccag
accacctccggcttcttcactgagaactgcatcgttgtggcggagggcgtcctgcagcac
agcggcgtcttcaaagtgcgcgcgctcggctttcctccagtcgagctccgcagcgagtcc
cgcctcgccgccaagaacttggacttttttggcgggagcactccgagtgaggatgagcag
ctggcggcggctgcagcactggcagaagacgaggcggaccgcatagtggtgctgtcagac
ctctggcttgacaagcccgccacccttgataggctgcgcgtcgtgctagaaggctttgag
gggttggagcgcgtgccgtccatgtttgtgctgctgggcaacttccagtccttctcatgc
aacgccgcctccaccgattacgccgcgctgaaggacaactttggcgccctcgcaggaaca
ctggcctccttcccacgcatcagggcggagagccggctggtgtttgtgccggggctggga
gacgcgggtccgggggcgatcctgccgcggccgccgcttccggagagcctcatcggcgct
ctgcgggagcagctgcccaccgcactgttcacctcaaacccctgccgcatccgtcacttc
aaccaggcatgcccaaataaccccttgctgtctttgctgtgccattctaccactacgaat
ttgagcaccgagattgtggtgttccgggacaatcttcagaatcgcatgcgcaagctctgt
cttctcgcgcccaacgatgagggcactggcgcggaggcttcgtcggatgctgcgttcgag
catctgtgcgcgacgctgctgcagcagagccacctgtgccctgtcccgctggaagcccaa
cctgtctactggagctacgaccatgcgctgtcgctttatcccctgccggacgccctcatt
ctggccgacccggccccgtgcgcgtcgtttgcattccctccgctgccgccagatcagcgc
ggcgccgcatgcgtctgcctcaatccggggtcgtttgcaaacgggacatttgctgcgtac
tgccctgccacacgagaggtcgagctgtgtgatgttcctgaggaggaggattga

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