Coccomyxa subellipsoidea: COCSUDRAFT_63990
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Entry
COCSUDRAFT_63990 CDS
T02914
Name
(RefSeq) pre-mRNA-splicing factor
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSUDRAFT_63990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_63990
Spliceosome [BR:
csl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
COCSUDRAFT_63990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
PYC_OADA
Motif
Other DBs
NCBI-GeneID:
17040854
NCBI-ProteinID:
XP_005647411
JGI:
63990
UniProt:
I0YWU8
LinkDB
All DBs
AA seq
493 aa
AA seq
DB search
MATLAESFLADLDDLSDASADEREDAEPENNENVEMDEENDDIEALNYDDLEAVARLQSG
DRYNTIMQQVRSALEKGGEMDESDAVWTGPSEEGPTYRLLVDCNQLAVDIDNEIAVVHNF
MRDKYRSKFPELESLVHHPMDYARVVKKIGNEMDMTLIDLEDILPQATVMVVSVTASTTS
GKQLSEENLNRMLGAADMALQLDADKADILRLVQLKMHHIAPNLSAAVGTEIAAKLMGVA
GGLTSLSKMPACNVQVLGAKRKHLSGFSSATQALHQGFVYGCEVIQNTPPALRGKAARMV
GAKCTLLARIDAYGQDPTGSAGAAMKEEMQKKVAKWQEPPQAKQTRVLPVPDMEPKKRRG
GRRARKYKERYGLTDVRKAANRVNFNQPEEEFLDGDDVVGLGVLGKEGSGQLRAQARTQK
QKLSAKVAKKYAKKLGGSGGATNGLSSTVAFTPLQGMELVNPVQAKDDDLRSGTESYFSE
YSGFRSIKKVPGL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccacacttgcagagtcgtttcttgcagatcttgacgatctctcagatgctagtgcg
gacgaaagggaagatgcagagccggaaaacaacgagaatgtggagatggacgaggaaaat
gacgacatcgaggcgttaaattatgacgatctcgaagctgtggcccgcctgcaatctggc
gatcggtacaacacgatcatgcagcaagtgaggagtgcgttggaaaaaggaggagagatg
gatgagtcggacgcagtatggacagggccttcagaagaggggccaacctacagacttttg
gtggactgcaaccagcttgcagtggacattgacaacgaaatagccgttgtgcacaacttc
atgcgagataagtacaggtcaaagttcccagagctggaaagcctggtgcatcacccgatg
gactatgcgcgcgttgtgaagaagattggcaatgagatggacatgaccctcatcgacctg
gaagacatcctgccgcaggcgacggtcatggtggtgtccgtaacggcgtccacgacgtcc
gggaagcagctgtcggaggaaaatttgaaccgcatgctgggcgcggctgacatggcgctc
cagctggacgctgacaaggcggacatcctgcgcctggtgcagctcaagatgcaccacatt
gcgcccaacctgtcggccgccgtcggtacggagatcgctgccaagctcatgggcgtggcc
ggcggtctcacctccctctccaagatgcccgcctgtaacgtgcaggtgctgggcgcgaag
aggaagcacctgtcgggcttcagctcggccacgcaggcgctgcatcagggatttgtgtac
ggctgcgaggtgatccagaacacaccccccgcgctgcgaggcaaggctgcgcgcatggtc
ggtgcgaaatgcacgctgctcgcgcgcatcgacgcctacggccaggaccccaccggctcc
gctggcgccgccatgaaggaggagatgcagaagaaggtggctaaatggcaggagccgcca
caggcaaagcagacgcgtgtgctgcccgtgcccgacatggaacccaagaagcgccgcggc
ggccgtcgcgcgcgcaagtacaaggagcgctacggcctcaccgatgtcagaaaggcagcc
aaccgggtgaacttcaaccagcctgaggaggagtttctggatggagatgatgtggtgggc
ctgggagtgctgggcaaggagggctccggccagctcagggcgcaggcgcggacgcagaag
cagaagctgtcggccaaggtggccaagaagtacgccaagaagctcggcggcagcggcggg
gccaccaacggcctctcatccactgtcgctttcacgcccctccagggaatggagttggtg
aacccagtgcaagccaaggacgatgatctgaggagcggcacagagtcctacttctcagaa
tactcgggattcaggtcaatcaagaaggttcccggcttgtga
DBGET
integrated database retrieval system
