Coccomyxa subellipsoidea: COCSUDRAFT_64195
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Entry
COCSUDRAFT_64195 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03013
Nucleocytoplasmic transport
csl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSUDRAFT_64195
03015 mRNA surveillance pathway
COCSUDRAFT_64195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_64195
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_64195
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
COCSUDRAFT_64195
Spliceosome [BR:
csl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
COCSUDRAFT_64195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
17045382
NCBI-ProteinID:
XP_005651911
JGI:
64195
UniProt:
I0Z9P8
LinkDB
All DBs
AA seq
402 aa
AA seq
DB search
MTSFRGVAAASDIRFSDKEKKLLRTLKFPKEFELKVEFKKINWEVMKAWIAKRVTELLGL
EDEVVIGYIYEQFESGEAVDPRILQINLTGFLEKNTSLFVKELWVLLNSANQNQSGIPQQ
ILDEKAEELRKKKEVQDAINEKLEKDKEKRRAEARDAEKRERTERDKRRREREDRERKER
NIRIDRERKERADQDAAHKRRMEEREKERERLRDRDRQRDRDRLDRDRVRGRERDHDRRG
RDRSSPPKRSRHGDTEQREQRPQRPQRSVSRSPAVEDALLDARTGDGVKAAERAEGGEAA
VQPQQIEAGDMSMEGQGLAGRDGEAPNGALEGERKKAKKEKKGKKEKKEKKEKKEKKEKK
EKKEKRERVREGSGDGALSEEEEKKAFEEDLRQKALEHRAMA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacgagttttcgtggagtcgctgctgcatcagacattcgattctcagacaaggagaag
aagctcctgaggaccctgaaattcccaaaggaattcgagttgaaggttgaattcaagaaa
atcaattgggaagtgatgaaggcctggatcgccaagagggtgaccgagttgctggggctt
gaggatgaggtcgttataggctacatctatgaacaattcgagagtggagaggcggtagac
cccaggatcctgcagatcaacttgactggattcctggaaaagaacacaagcctgtttgtg
aaggagctgtgggtgcttctgaacagcgcaaaccagaaccaaagcggcatcccccagcag
attctggatgagaaggcggaggagctcaggaagaagaaggaagtgcaggacgccataaat
gagaagctggagaaggataaggagaagcgacgagcggaggcgcgcgatgcggagaagagg
gagcggaccgagcgagacaagcggagacgcgagcgcgaggacagggagcgtaaggagagg
aacatccgcatcgatcgcgaacgcaaggagcgcgccgaccaagacgccgcccacaagcgc
cgcatggaggagcgtgagaaggagagggagcggctgagagacagagacaggcagcgggac
agggatcgcttggacagggatagagttcggggcagagagagggatcatgacaggcgtggc
agggaccggtcatcgccgcccaaacgcagccggcatggggacacggagcagcgggagcag
cggccgcagcggccgcagcggagcgtgtcgagatctccggctgtggaggacgcgcttctg
gacgccagaaccggagatggcgtgaaggcagcggagagggcagagggtggggaggctgct
gtgcagccgcagcagattgaggcaggcgacatgagcatggaaggacaggggttggcaggc
agggatggcgaggctccaaatggggctctggagggagagaggaaaaaggcaaagaaggag
aagaagggaaagaaggagaaaaaagagaagaaagagaaaaaggagaagaaggaaaagaag
gagaagaaggagaagagagagcgggtcagggagggcagcggcgatggagccctgtcagaa
gaggaggagaaaaaggcttttgaggaagacctgcggcagaaggctctggaacacagggcc
atggcatag
DBGET
integrated database retrieval system