KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_64195
Entry
COCSUDRAFT_64195  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03013  Nucleocytoplasmic transport
csl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCSUDRAFT_64195
   03015 mRNA surveillance pathway
    COCSUDRAFT_64195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_64195
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_64195
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     COCSUDRAFT_64195
Spliceosome [BR:csl03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    COCSUDRAFT_64195
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 17045382
NCBI-ProteinID: XP_005651911
JGI: 64195
UniProt: I0Z9P8
LinkDB
AA seq 402 aa
MTSFRGVAAASDIRFSDKEKKLLRTLKFPKEFELKVEFKKINWEVMKAWIAKRVTELLGL
EDEVVIGYIYEQFESGEAVDPRILQINLTGFLEKNTSLFVKELWVLLNSANQNQSGIPQQ
ILDEKAEELRKKKEVQDAINEKLEKDKEKRRAEARDAEKRERTERDKRRREREDRERKER
NIRIDRERKERADQDAAHKRRMEEREKERERLRDRDRQRDRDRLDRDRVRGRERDHDRRG
RDRSSPPKRSRHGDTEQREQRPQRPQRSVSRSPAVEDALLDARTGDGVKAAERAEGGEAA
VQPQQIEAGDMSMEGQGLAGRDGEAPNGALEGERKKAKKEKKGKKEKKEKKEKKEKKEKK
EKKEKRERVREGSGDGALSEEEEKKAFEEDLRQKALEHRAMA
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgacgagttttcgtggagtcgctgctgcatcagacattcgattctcagacaaggagaag
aagctcctgaggaccctgaaattcccaaaggaattcgagttgaaggttgaattcaagaaa
atcaattgggaagtgatgaaggcctggatcgccaagagggtgaccgagttgctggggctt
gaggatgaggtcgttataggctacatctatgaacaattcgagagtggagaggcggtagac
cccaggatcctgcagatcaacttgactggattcctggaaaagaacacaagcctgtttgtg
aaggagctgtgggtgcttctgaacagcgcaaaccagaaccaaagcggcatcccccagcag
attctggatgagaaggcggaggagctcaggaagaagaaggaagtgcaggacgccataaat
gagaagctggagaaggataaggagaagcgacgagcggaggcgcgcgatgcggagaagagg
gagcggaccgagcgagacaagcggagacgcgagcgcgaggacagggagcgtaaggagagg
aacatccgcatcgatcgcgaacgcaaggagcgcgccgaccaagacgccgcccacaagcgc
cgcatggaggagcgtgagaaggagagggagcggctgagagacagagacaggcagcgggac
agggatcgcttggacagggatagagttcggggcagagagagggatcatgacaggcgtggc
agggaccggtcatcgccgcccaaacgcagccggcatggggacacggagcagcgggagcag
cggccgcagcggccgcagcggagcgtgtcgagatctccggctgtggaggacgcgcttctg
gacgccagaaccggagatggcgtgaaggcagcggagagggcagagggtggggaggctgct
gtgcagccgcagcagattgaggcaggcgacatgagcatggaaggacaggggttggcaggc
agggatggcgaggctccaaatggggctctggagggagagaggaaaaaggcaaagaaggag
aagaagggaaagaaggagaaaaaagagaagaaagagaaaaaggagaagaaggaaaagaag
gagaagaaggagaagagagagcgggtcagggagggcagcggcgatggagccctgtcagaa
gaggaggagaaaaaggcttttgaggaagacctgcggcagaaggctctggaacacagggcc
atggcatag

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