Coccomyxa subellipsoidea: COCSUDRAFT_64249
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Entry
COCSUDRAFT_64249 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_64249
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_64249
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
COCSUDRAFT_64249
Spliceosome [BR:
csl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
COCSUDRAFT_64249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_PNO1_2nd
SAP
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
WW
MOEP19
KH_PARP14_8
WW_TCERG1
SAP_new25
Glyco_hyd_101C
WW_2
Motif
Other DBs
NCBI-GeneID:
17045491
NCBI-ProteinID:
XP_005652020
JGI:
64249
UniProt:
I0ZA07
LinkDB
All DBs
AA seq
632 aa
AA seq
DB search
MVTLEDVKKMKVQELRDELEARSLPTAGLKAELVERLEEALGGGDGDGAAAEDAPAEAEA
PDAPAAEEPAQEAPAVEEPTPAEPVAVETTAVGMETAEVEEPAAPEVPQPTEGAVATPDV
PAVTEAPAPVEAPAAEQFDAVAAAQAQAQAIAAKFAQQQAAGEGAAGGEDFGNNKRKFED
EPVADSAEEDHMRKRASFSGPEAFNGGSKFSDAPGGFSDAAPAVNPGLADASNGGGVPSG
MAAQGQFYETIDIPAPMVGKLIGKGGETIKQLQYNTNTRVQIDHQTPGEAKKVSIQGDSH
EAVQAAKQQVEQIVSMDDSGAGGASQSVECPQGIVGRIIGRGGETIRALQQASQAHIVVD
QNYPEGEPRRVNISGRPDAVERAVKMVSELISGEPGSAQSIIQKVHYGAGVTREVQCPKG
MVGRVIGKGGETIKALQKNFGANIQIDQTTDPMKITIAGQPPAVESAAAAVTEIINGGNP
YLGPTAGAGYGGARPGFGAPGGYGAPSYGAAGFGGYGGYPGQAAPQAYGGYSPYGYAQPY
GAPQAGYGSYGGYGADPYAAAAGAGGGYGGYGGAAGGQGAAGGGSGGSGTWQARLCLIIA
WCMQELQDDQGRAYYYNTTTGASQWEKPAELA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccctcgaggatgtcaagaagatgaaagtgcaggaattgcgtgatgagctggag
gctagaagcttgccaacagcgggcctgaaagcagagcttgttgagcgcttagaagaggct
ctgggaggcggggatggtgatggcgctgctgcagaggacgcgcctgctgaggctgaagcc
ccagatgcacctgctgctgaagagcctgcccaggaggctcctgccgtcgaggagccaacc
cctgccgagccagtggcggtggagacaactgccgttggcatggagactgcggaggttgag
gagcctgcagccccagaggtgcctcagcctacagagggagcagtggccacccctgatgtg
ccagccgtgacggaggcacctgcacctgtggaggcgcctgctgcagagcagttcgacgcc
gttgcggcggcccaagcacaagctcaggcgatcgccgcgaagtttgcgcagcagcaagca
gccggagaaggtgctgcgggaggcgaggactttgggaacaataagaggaagttcgaagac
gagccggtggcggacagcgcggaggaggatcatatgcgaaagcgcgccagcttcagtggg
cctgaagccttcaacggggggagcaagttctcggacgctccaggcggcttctctgacgca
gcgccagctgttaaccccggcctggctgacgcatccaacggcggcggcgtgcccagcggc
atggctgcacagggccagttctacgaaaccattgacatccctgcgcccatggtgggcaag
ctgatcggcaagggcggcgagaccatcaagcagctgcagtacaacacgaacacgcgcgtg
cagatcgaccaccagacccccggcgaggccaagaaggtgtccatccagggcgacagccat
gaggccgtgcaggccgctaagcagcaggtggagcagattgtgtccatggacgactctggc
gccggcggcgcatcccagtctgtggagtgcccccaggggattgtgggccgcatcatcggc
cgcggtggagagaccatccgcgctctgcagcaggccagccaggcccacatagtggtggac
cagaactatcccgagggtgagccgcgccgtgtcaacatctccggccgccccgacgccgtc
gagcgcgccgtcaagatggtcagcgagctcatcagcggcgagcccggctccgcgcagtca
atcattcagaaggtgcattatggtgctggcgtgacgcgcgaggtgcagtgccccaagggc
atggtgggccgcgtgattggcaagggcggcgagaccatcaaggccctgcagaagaacttt
ggcgccaacatccagatcgaccagaccaccgacccaatgaagatcaccattgcggggcag
cctcctgccgtggagagcgccgctgcagctgtgactgagatcatcaacggaggcaacccc
tacctgggccccaccgctggcgctggctacgggggagcgcgtcctggcttcggcgctcca
ggcggctatggcgcgccaagctacggagcagctggcttcggcggctacggcggatacccg
gggcaggccgcgccacaggcgtatggtggatacagcccctacggctacgcgcagccctac
ggcgcgccccaggcaggctatgggagctacggcggctacggcgcggacccctacgcggcg
gcggctggtgccggcggcggctacggtggctacggaggcgcggctggcggccagggagca
gctggcggcggctccggcggctctggaacctggcaggcacgcctctgcctaattattgca
tggtgcatgcaggagctgcaggatgaccagggccgtgcatactactacaacaccacgact
ggtgcaagccagtgggagaagccggcagagcttgcctga
DBGET
integrated database retrieval system
