KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_6434
Entry
COCSUDRAFT_6434   CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K11864  BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    COCSUDRAFT_6434
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:csl01002]
    COCSUDRAFT_6434
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csl04121]
    COCSUDRAFT_6434
   03036 Chromosome and associated proteins [BR:csl03036]
    COCSUDRAFT_6434
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_6434
Peptidases and inhibitors [BR:csl01002]
 Metallo peptidases
  Family M67
   COCSUDRAFT_6434
Ubiquitin system [BR:csl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    COCSUDRAFT_6434
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    COCSUDRAFT_6434
   BRISC complex
    COCSUDRAFT_6434
Chromosome and associated proteins [BR:csl03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     COCSUDRAFT_6434
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     COCSUDRAFT_6434
SSDB
Motif
Pfam: JAB BRCC36_C Prok-JAB UPF0172
Other DBs
NCBI-GeneID: 17036411
NCBI-ProteinID: XP_005643070
JGI: 6434
UniProt: I0YJF7
LinkDB
AA seq 268 aa
DVFSVCATHALTTESEEVMGLLLGDVHYGTNGEAVAHISVAMPQIRTDRRKDRVEASPEQ
LASAMAIGEKLSEGSQTKVRVIGWYHSHPHITVLPSHVDVRTQGSYQMLDEGFIGIILST
FNQDTAECTQQIQVTAFQSVQQTQHALASAGGQWTRREVPLTVGAELAHPGLQPDGLRVL
LEVLFEEERQAFTDASCSRWCKACDGCCMSSRSGRVHPLTAMHHAGVYQQHLCRLMEVVA
GPVLASLRGRSAEASLQFEQLQVMKASL
NT seq 804 nt   +upstreamnt  +downstreamnt
gatgttttcagcgtctgtgccactcacgctttgacgaccgagtctgaggaagtgatgggc
ctactccttggcgatgtgcattatggcacgaatggggaagcagtcgcccacatttcggtg
gcgatgcctcaaattcgtacagaccgaagaaaggatcgggtggaagccagtccagagcag
ctagcctcagccatggcaattggggagaagctatctgaggggagccagacaaaagtgagg
gtcattggctggtatcactcccaccctcacatcacagtgctgcccagccacgtggatgtg
cgcactcagggctcctaccagatgctcgacgagggcttcattggcatcattctgtcgacc
ttcaaccaggatacagcagagtgcacacagcagattcaggtcacagcgttccagtctgtg
cagcagacgcagcatgcactcgcgtcagcggggggccagtggacgcggcgggaggtccct
ttgacagttggcgctgagctggcgcaccctgggctccagcctgacgggctgcgcgttctg
ctggaggtgctcttcgaagaagagcggcaggccttcacagacgcctcatgcagccgatgg
tgcaaagcttgtgatggatgctgcatgtcttccaggagtgggcgggtgcatccactcaca
gccatgcaccacgccggggtgtatcagcagcacctgtgccggctgatggaagtagtcgca
gggccggtgctggccagcctacgcgggcggtctgcagaggcgtccctccaatttgaacag
ctgcaggtcatgaaggcctccctt

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