Coccomyxa subellipsoidea: COCSUDRAFT_64485
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Entry
COCSUDRAFT_64485 CDS
T02914
Name
(RefSeq) Gcd10p-domain-containing protein
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_64485
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
COCSUDRAFT_64485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gcd10p
Methyltransf_18
Motif
Other DBs
NCBI-GeneID:
17044435
NCBI-ProteinID:
XP_005650969
JGI:
64485
UniProt:
I0Z706
LinkDB
All DBs
AA seq
472 aa
AA seq
DB search
MLSCIIREGDNAVLDINNSHKMFVTVKPGSKVKIGKAMCSLEPLIGQYYGIQFALAADGQ
TLEFKRPKMERDDGTQKDEWHANGTMDKNNSELLDRGDAHQNLKPADIEAMREAGMGGEA
IVEALLANSETYESKTQFAQAKYRKRKADKYMAQATLVRPTARSVAEAYFAKSPQKIQGL
RADSLALLLSLANIGSHARVLVIETCGGLVTGAVAERLGGSGLVVSGYTGLRAPSLDIVR
QFNFPASSKASMVTAPINALLQCGQPAPAEIPVSAPPESNAAAAEAGAEDTKQDTPMADA
GAEQAAEALTPAQEGDAAVPVAGTTTAKAEPVSNGTTGAAEGGVAQTVAESRSGHDATSS
STRDLPDIVQQTCRQGFSCCILAAPQVQPLALLRKVLPLLAPSAAFAVFANCLQPLADCM
LALQVSKEAVALQLQESWWREHQVLPGRTHPEMMVSATGGYILTGYKVVTPA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtgcatcattcgggagggcgacaatgccgtactcgatatcaacaattctcat
aagatgtttgtcaccgtcaaaccgggcagcaaggtgaagattggcaaggctatgtgctct
ctggagcccctcattggccagtactatggcatacagtttgcgctggcggctgatggacag
accctcgaatttaagcgaccaaagatggaaagggatgacgggacccaaaaggatgagtgg
catgccaatgggaccatggacaagaacaatagcgagctgctggacagaggggatgcccat
cagaacctgaagcccgcggacatcgaggccatgcgcgaagctgggatgggaggcgaagcc
atcgtcgaagccttgctggcaaacagcgagacctacgaaagcaaaacgcagtttgcacag
gcaaaatatcgcaagcgcaaggcggacaaatacatggcacaggcgacgctggtcaggccc
acagcacgatcagtggccgaggcatattttgccaagtccccccagaaaatccagggcctg
cgcgccgacagcctggccttgctactctccctcgccaacattggctcgcatgccagggtg
cttgtgattgagacctgcggcggcttagtcactggcgctgtggcagaacgcctgggaggc
tctggcctggtggtgtcagggtacaccggactgagggctccttcgctggacattgtgcgc
cagttcaacttcccagccagcagcaaggccagcatggtgacagcgcccatcaatgctctc
ctgcagtgcggacagccagcccctgcagaaatcccagtgagcgctcctccagagagcaac
gcagcagcagcagaggccggagcagaagatacgaagcaggacacgcccatggcggatgca
ggcgccgagcaggcagcagaggcgctgacaccggcacaggagggggatgcagcagtgcct
gtggcaggcaccactacagctaaagctgagccggtcagtaatggaacaactggggcagca
gaaggaggggtagcgcaaacagttgcagagagcagatcagggcatgacgccaccagcagc
tccacgcgggacttgccagacattgtccagcagacctgccgccaaggcttcagctgctgt
attctggcggctccccaggttcagcccctggcgctgctgcgcaaagtgcttccgctgctg
gcgccgtctgctgcgtttgcagtctttgcaaactgcttgcagccgctcgcggactgcatg
ctggccctgcaggtctcaaaggaagcagtggcgctacagttgcaagagtcgtggtggcgg
gagcaccaggtgttgccagggaggacacatccggagatgatggtttcagcgacgggaggc
tacattctgacaggctacaaagtagtgacaccagcatga
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