KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_64653
Entry
COCSUDRAFT_64653  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_64653
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_64653
Spliceosome [BR:csl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    COCSUDRAFT_64653
 Complex B
    COCSUDRAFT_64653
SSDB
Motif
Pfam: RRM_1 MRVI1
Other DBs
NCBI-GeneID: 17044787
NCBI-ProteinID: XP_005651321
JGI: 64653
UniProt: I0Z808
LinkDB
AA seq 472 aa
MARERSRERSRDNKHKSSKRRSRSRSRSRDRKSRKHSSRDRSRDRSPGRRRDRKSSFSDA
EQVQQAQMAIQQQQLQQQMMSQQLLLQQQALMGGAASGKKQREVYVGNLTIGAVTDVMLR
ELFNGALAHLMPDPQLNPPVINVGMDPSGRFGFVEMRTEELATSGMALDKVELCGRNINV
GRPKGYVEPPQGHAPPAQLASAQMFAARLGTGPTRVVLLKNMLKALQLLDEAERTDASLM
EDVKEECGKYGTVEGIAVPRPPPTVAADEPSRVYVKFGTPDESSRVKEAFNGRQFDGNSI
TAAFASEDDFNQAAAGKWTGAAPQAPAAGFMGSPIGGPAPLPAGISGIAALNPATGGMVN
PNMAPVLDPATVPFQEGWIKLRGIPFTITKPDICSFFSTCGQMSEDKVKLVVGPDGRPTG
EAYVEISGAGAKLRLALAKDRQIMPGSSRYIEIFTSTRDEVDRRALTGVMLV
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggctagggaaagatcaagagagcgatcgcgggacaataagcacaagagctccaagcgg
cgatcgaggagcagaagccgttccagagaccgcaaaagtcggaagcacagcagccgggac
cgcagcagggaccgaagccctggccgccggagggacaggaagagcagcttcagtgatgca
gagcaggtgcagcaggcgcaaatggcgatccagcagcagcagctccagcaacagatgatg
tcacagcagcttctcctccagcagcaggcactgatgggtggtgccgccagcggcaagaag
cagcgcgaggtgtatgtgggcaacctgaccattggagcagtcacggatgtgatgctgcgg
gagctgttcaatggtgccctggcacacctcatgccagacccacagctcaaccctcctgtc
atcaacgtgggcatggacccctcagggcgctttggctttgtggagatgcgcacggaggag
ctggcgacgagcggcatggcactggacaaggtggagctgtgcggtcgcaacatcaacgtc
gggcggcccaagggctatgttgagcccccacaggggcacgcgccaccggcgcagcttgcg
tctgcgcagatgtttgcggccaggctgggcaccgggcccacgcgcgtggtgctgctgaag
aacatgctcaaggcgctgcagctgctcgacgaggccgaacgcacagatgcaagcctgatg
gaggacgttaaggaggagtgcggcaagtacggcacggtggaaggcatcgcggtgccacgg
ccgccgccgacggtggccgcagacgagccgagccgggtgtatgtcaagtttggcacgccg
gatgagagcagccgcgtcaaggaggccttcaacggccgccaatttgacggcaactcaatc
acggccgcctttgccagcgaggacgactttaaccaggcggctgccggcaagtggaccggg
gccgctccgcaggcgccggccgccggcttcatgggatccccgattggaggcccagccccg
ctgccggcaggcatcagcggcattgcagcgctgaacccggcgaccgggggcatggtgaac
cccaacatggcgcccgtgctggacccggccacggtgcccttccaggagggctggatcaag
ctgcgcggcatccctttcaccatcaccaagccggacatctgctccttcttctcgacgtgc
gggcagatgagcgaggacaaggtgaagctggtggtgggcccggacgggcggccgaccggg
gaggcctacgtggagatcagcggcgcgggcgccaagctgcgcctggcgctggccaaggac
cgccagatcatgccgggctcctcgcgctacatcgagatcttcacctccactcgcgatgaa
gttgaccgccgcgccctcaccggcgtcatgctcgtgtaa

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