KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_64802
Entry
COCSUDRAFT_64802  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_64802
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_64802
Spliceosome [BR:csl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    COCSUDRAFT_64802
 Complex B
    COCSUDRAFT_64802
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 17043725
NCBI-ProteinID: XP_005650265
JGI: 64802
UniProt: I0Z502
LinkDB
AA seq 581 aa
MTEDAVVAAPSAEEPVEGKPSVVKETADGGNQADVAAEGGSPAEQQVDKDSADAEPHSSG
ANGGQENKAAENGGSAGIVKEPHQGGNDSQHEKKERSAAKVEEKDSSKHERERKDREKDR
SREKERHRDREKNRKDRHRDSDRKDSKREKEDKKERRRSVERDRDSSRKRRETPPAREKD
REMSKRSHSDRKDKRSRHRSRSRDRHRRSRRRDSSSSEDDDYGYVPRKRQEAPQQAGYST
SYVDPYASLRSSTITSSDPQEIARQMQEQQLKARQLVLQQQAASAVAAASKTQREVYVGN
LVAGLVTEDALRQLFNSTMAAAFPNLLAQGLEAVVSVSMHSEGRYAFVELRTPEMASAAL
QLSNQVQLLGQSISVGRPSGYVDPSRAQLAASAAAAALSAFQAGDMQAMEYQLQQANLSV
PGLNAPSMPSPATAAAAASPGSLPLPPPPALPQASAPPFSAKAPVNMAASVEPGAPTQYL
QVTGMVTPDVLVDDEEYSEVIQDLQEECSKYGQVLRVLVPRPPNPAASNELFGSNNYGKA
FAEFADVSGCSAAKAAIHGRLFAGETVQATYVTAEYFAQLR
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgaccgaggatgctgtggtcgctgcgccgagcgcagaggagccggttgaaggaaagcct
tctgtggtaaaggagactgcagatggtgggaatcaggcagatgttgcagcggagggaggg
agccctgctgagcagcaggtggacaaggacagtgctgacgcagaaccgcactcatctggt
gccaatggcggtcaggaaaacaaggctgccgagaacggagggtcagctggaattgtgaag
gagcctcaccagggaggcaacgacagccagcacgagaagaaggagaggtctgctgccaag
gtcgaggagaaggacagcagcaagcatgagagggaaagaaaggatcgagagaaggacagg
agcagagaaaaggagagacacagggatcgggaaaagaacaggaaggataggcacagagac
agtgacagaaaagactccaaacgtgagaaggaggacaagaaggagcggagacgttcggtg
gaaagagacagggactccagcaggaagcggcgtgagacaccaccagcaagggagaaggac
agggaaatgtccaagcggagccacagtgacaggaaggacaagaggtctcgtcacagatcc
aggtcgcgagacaggcacaggaggagccgcaggcgtgacagctccagctccgaggacgac
gattatggatatgtacctcgcaagcgccaggaagctccccagcaagctggctacagcacc
agctatgtcgatccctacgcttccctgcgcagcagcaccatcacctcttccgatccacaa
gagattgccaggcagatgcaggagcagcagctgaaggcgcgtcagctggttctccagcag
caggcagcatctgcggtggccgctgccagcaagacacagcgcgaggtgtatgtgggaaat
ctggtggcgggtctggtaacagaagatgcgctgcggcagctgttcaacagcacgatggcg
gccgcgtttcccaacttgctggcacaggggctggaggcggttgtgagcgtttcaatgcac
agcgaggggcgctacgcgtttgtggagctgcggacgcctgagatggccagcgcggcgctg
cagctcagcaaccaggtgcagctgctgggccagtcgatctctgtggggcgcccatccgga
tatgtggacccctcccgcgcgcagctggcagcctccgcagctgctgcagctctgtccgcc
ttccaggcgggggacatgcaagcgatggagtaccagctgcagcaggcgaatctgtccgtg
ccgggcctgaacgcaccgtcgatgcccagcccggcgacggccgccgcggccgccagcccc
ggttcactcccgctgcctccgcccccggcactgccacaggcatctgcgccaccattctct
gcaaaggcgccggtgaacatggcagcgtctgtggagccgggcgctccaacgcagtacctg
caggtgaccgggatggtcacaccggatgtcctcgtggacgacgaagaatacagcgaggta
atccaggacttgcaggaggagtgcagcaagtatgggcaggttttgcgtgtgctggtgccc
aggccgcccaacccagccgcctccaacgagctcttcggctccaacaactatggcaaggca
tttgccgagtttgctgatgtgagcggctgctctgccgccaaggcagcaatccatgggcgg
ctctttgctggcgagacagtgcaggccacttatgtgactgccgaatactttgcacagctc
cgttga

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