Coccomyxa subellipsoidea: COCSUDRAFT_64873
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Entry
COCSUDRAFT_64873 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COCSUDRAFT_64873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_64873
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
COCSUDRAFT_64873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
17043867
NCBI-ProteinID:
XP_005650407
JGI:
64873
UniProt:
I0Z5E4
LinkDB
All DBs
AA seq
685 aa
AA seq
DB search
MPSTSQKVASFLHDPHALDALVLNMQQWQGGKVQGVAPVVVDPYLGRHLRPHQREGLQFL
YECVMGLRESGRFGAVLADDMGLGKTLQVISLIWTLLRQGPSGKPAVKRVIVVTPCSLTQ
NWADEIKKWLGNERIKALVLQAGPEAKGQVLDFKAGNVWKVMVASYETLRKHTDALAGCV
DLLVCDEGHRLKAAAGSKTISALLALRCPRRILVTGTPLQNNLDEFFALINFVNPDLLGS
MGTFRRIFGDPISRSRDRDSTPEEVALGHQRSAELSRRVDAFMLRRTKEINAAYLPPLHS
FVVFCPPSPLQVALYKQLVRSNMVTSLLTSAGGCSEGSALSCIMAMRKLCNHPDMLFVGD
DMEAAGLEADLHPLYPAGYQLGQPQHSGKMQVLEGLLAHVLGGKAGERVVVVSNSTKTLD
RVSAVCDSRRWTTVRICGDVNAAKRQDIVTAFNRHNVGQVLLLSAKAGGAGLNLIGANRL
VLFDTDWNPATDLQAMARIWRDGQTKPCTIYRLLTTGAIDEKMYQRQLMKGELADAMEQA
SKQKGPSFTREELRALFSLNTSTSCETAVIMRNSASAQDWLDVKDSLDDEPLKACVASGN
ISYVRKIANEQDFLKDIEQPREATPPASDDAAGGSCQSSEDGVALDRDTADTAEPQPFPK
CNGAHVAFNKETGDNVGPLLIKKDD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcacttcgcagaaggtggcttctttcctgcatgacccccatgcactggatgcc
ctcgtcctcaacatgcagcagtggcaaggaggcaaggtgcagggggtggctcccgtggtg
gtggacccttacctgggcaggcacctgcggccgcaccagcgtgagggcctgcagtttctg
tatgagtgtgtcatgggcctgcgcgagtccggccgctttggagccgtcctggcagatgac
atgggcctggggaagaccctgcaggtgatcagtctcatctggacactgctgcggcaagga
ccttctgggaaaccggctgtgaagcgagtcattgtagtgacaccatgctccctcacgcag
aactgggcagacgagatcaaaaagtggctgggcaacgagcgtattaaagccctcgtgctg
caagcaggaccggaagcaaaggggcaggtgctggacttcaaggcgggcaatgtgtggaaa
gtgatggtggcatcctatgagactctgcgcaagcacacggatgcgctggcgggctgtgtg
gaccttctggtgtgcgatgaaggccataggctgaaggcggcggccggcagcaagaccatc
tcggctctgctggccctgcgctgcccccgccgcattctcgtcactggcacgcccctgcag
aacaacctggacgagttctttgcgctgatcaacttcgtcaacccggacctgctgggctcg
atgggcaccttccggcgcatctttggggacccgatctcacgctcgcgcgaccgcgactcc
acaccggaggaggtggcgctcgggcatcagcgctcggcagagctgagccgccgtgtggac
gccttcatgctgcgccgcaccaaggagatcaacgcggcgtacctcccgcctctgcactcc
ttcgtcgtcttctgcccgccctccccgctgcaggtggcgctgtacaagcagctggtgcgc
tccaacatggtgacatccctgctgacatcagcgggcggctgcagcgaaggcagcgcgctg
tcatgcatcatggccatgcgtaagctgtgcaaccacccggacatgctcttcgtcggggac
gacatggaggccgccggtcttgaggcggacctgcaccccctgtaccccgctggataccag
ctcggccagccacagcactctgggaagatgcaggtcttggaagggctgctggcacatgtc
ctgggaggcaaggcaggtgagcgggtggtggtggtttccaacagcaccaagacgctggac
cgggtgtcggcagtgtgcgacagccgccgctggacgactgtgcgcatctgcggagacgtc
aatgccgccaaacgccaggacatcgtcaccgccttcaaccgccacaacgttggccaggtg
ctgctgctttcggcaaaggccgggggcgcgggcctcaacctgatcggcgccaatcgcctt
gtcctctttgacacagactggaaccccgccacagacctgcaggcaatggcgcgcatctgg
agggacggccagacaaagccctgcaccatctaccggctgctcacgacaggcgccatcgat
gagaagatgtaccagaggcagctcatgaagggtgagctggcggatgcgatggagcaggcc
agcaagcagaaggggccttcgttcacgcgtgaggagctgagggcactgttctccctcaac
acatcgacttcctgtgagaccgctgtcatcatgcgcaactctgccagcgcccaggactgg
ctggatgtgaaggacagtctggatgatgagcctctgaaggcatgtgtggcaagcggaaac
atcagctatgtgaggaagatcgccaacgagcaggactttctgaaggacatagagcagccg
cgcgaagctacgcctccagcttctgatgatgcagcaggcggcagctgtcaaagctcagag
gatggtgtagctctggacagggacacagcagacacagcagagcctcagccgtttcccaag
tgcaacggagcccatgtggccttcaacaaggagacaggggacaacgtgggaccgctcctg
atcaagaaggacgattga
DBGET
integrated database retrieval system
