Coccomyxa subellipsoidea: COCSUDRAFT_64902
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Entry
COCSUDRAFT_64902 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K03504
DNA polymerase delta subunit 3
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03030
DNA replication
csl03410
Base excision repair
csl03420
Nucleotide excision repair
csl03430
Mismatch repair
csl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCSUDRAFT_64902
03410 Base excision repair
COCSUDRAFT_64902
03420 Nucleotide excision repair
COCSUDRAFT_64902
03430 Mismatch repair
COCSUDRAFT_64902
03440 Homologous recombination
COCSUDRAFT_64902
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csl01009
]
COCSUDRAFT_64902
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csl03032
]
COCSUDRAFT_64902
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_64902
Protein phosphatases and associated proteins [BR:
csl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
COCSUDRAFT_64902
DNA replication proteins [BR:
csl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
COCSUDRAFT_64902
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
COCSUDRAFT_64902
MMR (mismatch excision repair)
DNA polymerase delta complex
COCSUDRAFT_64902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
17043931
NCBI-ProteinID:
XP_005650471
JGI:
64902
UniProt:
I0Z5K8
LinkDB
All DBs
AA seq
561 aa
AA seq
DB search
MGIDKQKLFTTINELVEEELKVVSFKWLARQYSLPANAAKKVLSEFLEKNQGRVSATYLI
SGWTKGPEPEHSIQLVDSGSLIERRKTLDPITSLHVYSVQPTQPKDASELWNTDNLQTLE
FFTSLVKGGSDNCLADNRWSAVQCQQAKHDPSLSTAKALGARKAADAAKEPAAPANGGVV
AAIKKAAAGKEAGKGTEAAKDKGSGPAAAAAPSTAPKPAAAPAVASGPATNQAKGPAKAA
GGAGKKGAALSAMWNKAPPKKASVAAAAAKSTAAGKAKAAARPAEAKQNSTVAVDAEAAL
RLNEEAESSSESEEEQAPIQRSNPGRRAHVLHDDEDESGPDSPAQPASKRPRSGNAPARK
NTTVLNESDDDSDWEAPKRGAGRGTAAAKQNGVTAAPKAAVVESEEEEGASQKGKAAKPA
AQKKTGAKAAAAKRPSPGTIKDHGEAAGGPKRRKVLRTTYNDKGEEVTEMVYEDEPAPEP
AQPAEQEKEDVPAAAAAKAAQLKAATPAEPAAAQAAKASSQSQGSAGAPPPKKEPAKAGA
KKGGAKVLPGQRGIKSFFAKK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgacaagcagaaactcttcactaccataaatgagcttgtggaagaagagctc
aaggtggtctccttcaaatggttggcacgacaatattctctaccagctaatgcagccaag
aaggtcctgtcggagttcctcgagaagaaccagggcagggtctcagcgacatatctcata
tccggctggactaagggacccgagccagagcacagcatccagctggtcgattctggaagc
ctcatagagcgccgcaagacgctggaccccatcacatccctgcacgtctacagcgtgcag
cccacgcagccaaaggatgcgtcggagctgtggaacacagacaacttgcagacgctggaa
ttcttcaccagcctggtaaagggcggcagcgacaactgcctggcagacaaccgctggagc
gccgtgcagtgccagcaggcaaagcatgacccctcactcagcacagccaaggctcttggc
gcgcgcaaagcagcagatgcagccaaggaaccagctgctccggccaatggaggtgtcgtg
gctgccatcaaaaaggccgctgccggtaaggaggctggcaaaggcacggaggcagcgaag
gacaaggggtcggggccggcagccgcagctgcacccagcactgcaccaaaacctgcggca
gcaccggcggtagcgtccggcccagccactaatcaagccaaggggccagccaaggctgca
ggaggcgctgggaagaagggagcagcgctgtcagccatgtggaacaaggccccgcccaaa
aaggcgagcgtggcagcggcagcagcaaagtccacagctgccgggaaggccaaggcagct
gcgcggccggccgaagcaaagcagaattccaccgttgctgtggacgccgaagcagccctg
cgcctgaatgaagaggcagagagcagcagcgaaagcgaagaggagcaggcgccaatccag
cggagcaatccgggcaggcgagcgcacgtgctgcacgacgatgaagatgagtcaggccct
gactcaccggcccagcccgccagcaagcggccgcgctccgggaacgcccccgcacggaag
aacaccactgtcctcaatgagtcggatgacgacagcgactgggaagctcccaagaggggc
gcagggagaggtactgcggcggcaaagcaaaatggcgtaacggccgcaccgaaggctgcc
gtggtggagagcgaggaagaggagggagctagtcagaaggggaaggcagcgaagcctgct
gcccagaagaagacgggcgcaaaggcagccgcggccaagcggccgtcgccagggaccatc
aaagaccatggcgaggccgcaggcggccccaagcggaggaaggtgctgcgcacgacatac
aatgacaagggggaggaggtgactgagatggtgtatgaggacgagcctgcgccagagcca
gcccagccggcagaacaggagaaggaggatgtcccggcagcagctgcagcaaaagcggcg
cagctgaaggcggccacaccggcagagcctgcagcggcgcaggcggccaaggcatcaagc
cagtcgcagggcagcgctggagcaccgccgccaaagaaggagccggcaaaggcaggtgcc
aagaagggcggcgccaaagtgctgccgggccagcggggcatcaagtccttctttgccaag
aagtga
DBGET
integrated database retrieval system