KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_65132
Entry
COCSUDRAFT_65132  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K19612  2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_65132
   03029 Mitochondrial biogenesis [BR:csl03029]
    COCSUDRAFT_65132
Enzymes [BR:csl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     COCSUDRAFT_65132
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     COCSUDRAFT_65132
Mitochondrial biogenesis [BR:csl03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    COCSUDRAFT_65132
SSDB
Motif
Pfam: Sua5_yciO_yrdC PDE12-like_N Exo_endo_phos IG_AIR9 DUF1487
Other DBs
NCBI-GeneID: 17043173
NCBI-ProteinID: XP_005649715
JGI: 65132
UniProt: I0Z3F2
LinkDB
AA seq 963 aa
MICSKLLPRTNILHSTIPYALWSRRVCSKHSLFKAASSSFQTVDMQQVVVKSFPAEENLQ
IELMVGGKQRFMDRPKTEPLERTLARIQKNAAPVPDKKAKRSPSQRKTQAEVSSITVELY
EDMLEGRQVAGSIPNAEAWQPGRILQVGETTFSIILNPPAADKLQVYGRPMVGYPLCPTV
QVMFSDEGDCRWQWYRSAERTAVAAASVNRSRSPSPRRRQPLPDSETEGTDAAWQPLPFA
QERVYSPIAEDAGHRLRLQCTPWRGSGSAHGEAASGKPVTVETDPVTAGPAFTAAAQRQA
HTSTPLAPPGVRVVTYNILADQYASTDYAQEHLFAYCPREYMVPEYRRPLIMQEILGYNA
DVICLQEVDGKAFTTFFQPLMSHAGFEGQYTNKAGETAEGSAMFYRRSRFELVHKVDIPM
KNVFASLLIGDARSLSLHAQFLPLLHASPHLVQALQRVSTVAQLSVLAPRQPAPADEGPL
CVVNTHLFFHPKASHIRTLHAAAMLAEAHAVMQEVGQQLGQTPALLFCGDLNSDKNDGIS
GAVELLQKGSLPPDHWDWAWGADFRFVKDGNAGEDTGDHASTSGSKPGNRQAPLLTMKMP
FSLRSADGGRYEYTNYVKGYSGLLDYVFFQPERMCAREALPLPGAAELAGWLPSQRFPSD
HLSLVFDLQWLPSEDAPATAAGPTGTAEHAESRSASSAPAELGSEQQRRGQPAGADAAGG
SSENGSASAFAWADGMLARGDGAEAAARPRGCVMPADESGAAVAAEALRRGDVVAVPTDT
LYGLAACANSEQGVGRLYAIKHRQAHVPLAICVADVAVVEQYGMCAHLPQGLLDDLLPGP
VTVLLARRPDAALSAALNPGVQTIGIRVPDSAFMLEACRQHGRAVALTSANISGAISPTS
IHDFEQLWPQCAAVFDAGIVGADRAGSTVVDLSLEGSFRILREGSHPSHVRQVLTEKYGI
AEQ
NT seq 2892 nt   +upstreamnt  +downstreamnt
atgatctgttccaaattgctacctagaactaacattctgcattccactattccttacgct
ctttggagccgacgtgtgtgctccaagcatagcctgttcaaagcagcttccagtagtttc
cagacagtagacatgcagcaggtagtggtgaagtcatttccggcggaggagaacctccag
atagagctgatggttggtgggaagcagcgcttcatggacaggcccaagacagagcccctg
gaacggactcttgctcgcattcagaagaatgctgcaccggtgccagataagaaggcgaaa
cggagcccctcgcagagaaaaacacaagcggaagttagcagcattacagtggagctatat
gaggatatgctggagggcaggcaagtggcagggagcattcctaatgctgaagcctggcag
cctggtcgcatcttgcaagtgggagagaccacgttctcaatcatcttgaatcctcctgca
gcagacaagctccaggtatatgggaggccaatggtgggctaccctctctgtccgacagtg
caggtcatgttctctgatgagggagactgcagatggcagtggtatcggtcagcagagagg
acagctgtcgcggctgcatcagtgaacagaagcagatctccatcaccccgaaggaggcag
cctttgccggactcagaaacagaaggcactgatgcagcgtggcagccacttccgtttgca
caagagagggtgtactcccctattgctgaggacgctggtcacaggctgcgcctccagtgc
accccctggaggggaagtggcagcgctcatggcgaggcagcctcgggaaagccagtgact
gtggagacagatccagtgacggcagggccagcatttacagccgctgcgcagcgccaggcg
cacaccagcacccccttggcgccccctggagtcagggtagtgacctacaacatcctggcc
gaccagtatgcctccacagactacgcgcaggagcacctgtttgcctactgccccagagag
tacatggtaccggagtacaggcggccgctgatcatgcaggagatcctgggctacaatgca
gacgtcatctgcctgcaggaggtggatgggaaggctttcaccaccttcttccagcccctc
atgagccatgcaggttttgaggggcagtacacaaacaaggctggggagactgcagagggc
tctgccatgttctaccgacggtcgcgctttgagcttgtgcataaagtcgacatcccgatg
aaaaatgtcttcgcctcgctgctgatcggtgatgccaggagcctctcgctccatgcacag
ttcttgccactgctacatgcctcgccccaccttgtgcaggcgctgcaaagggtgagcaca
gttgcgcagttgtcagtactggcgcccaggcagccagccccagccgacgagggaccgctg
tgcgtggtgaacacccacctgttcttccatcccaaggcttcccacatccgcacactccat
gcagccgccatgctggcagaggcacatgcagtcatgcaggaggttggtcagcagctgggg
cagacgcctgcactgctattctgcggcgacttgaactcagacaagaacgacggcatatca
ggcgctgttgagctgctgcaaaagggaagcctgccgcctgaccactgggactgggcttgg
ggcgccgacttccgctttgtcaaggacggaaatgctggcgaggacaccggcgatcatgct
tcaacctccggctctaagcctggcaacaggcaggcacctctcctgaccatgaagatgccg
ttcagcctgcgaagtgcagacggcggccgttatgagtacacaaactacgtgaagggctac
agcgggctgctggactatgtgtttttccagccggagcgcatgtgcgcgcgcgaggcgctg
ccgctgcctggcgcggccgagctggccggctggttaccctcccagcgcttcccctcggac
cacctctcccttgtcttcgacctgcaatggctgccctcggaggacgcccctgcgacagca
gccgggcctactggaacagctgagcatgcagaaagccgcagcgccagcagtgcaccagca
gagcttggatcggagcagcagcgtagaggccaacctgcaggggcagatgcggcgggtggt
tccagcgaaaatggcagtgcgtcagcttttgcgtgggctgatgggatgttggcgcggggg
gatggagcggaggcggcggcgcggccgagagggtgtgtgatgccggcggacgagagcggc
gcggcggtggctgccgaggcgctgagaagaggagatgtggtggctgtgcccactgacacg
ctgtacggcctggcagcctgcgccaacagcgagcagggcgtcgggaggttgtatgccatc
aagcacaggcaggcgcatgtgccgctggcgatctgcgtggctgacgtggcggtggtggag
cagtatggcatgtgcgcgcacctgccgcagggcctgctggatgacctgctgcccgggccg
gtgactgtgctgctggcgcggcgaccggatgcagcgctctctgctgctctgaatcccggt
gtacagacgattggaatacgggtaccggacagtgcattcatgctggaggcctgcaggcag
catgggagagcggttgcccttacatcagccaacattagcggtgcaatcagtcccacctcc
atccatgactttgagcagctgtggccgcagtgtgcagccgtctttgatgcaggcattgtg
ggcgcagacagagcggggtctacagtggttgatctatctctcgagggaagcttcaggatt
ttgagggaggggtctcatccttcccatgttcgtcaagtactcacggagaagtatggtatt
gccgaacagtaa

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