Coccomyxa subellipsoidea: COCSUDRAFT_65316
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Entry
COCSUDRAFT_65316 CDS
T02914
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_65316
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
COCSUDRAFT_65316
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
90S particles
Helicases
COCSUDRAFT_65316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DHX37_C
HA2_N
DEAD
AAA_22
HA2_C
AAA_19
ATPase
AAA_16
nSTAND3
FeoC
TsaE
Motif
Other DBs
NCBI-GeneID:
17043585
NCBI-ProteinID:
XP_005650127
JGI:
65316
UniProt:
I0Z4L4
LinkDB
All DBs
AA seq
1229 aa
AA seq
DB search
MRSKRERKQKGNATKTLKRKATAVEGSQSLDVDNTDAEQDARLGSTPDDSNAVFLMPKPK
KEDTGAAEDAAVARELSKAQKRKLKKVQEEKEKRVERRKVLASLAEHELPSEHLALMQST
ARRGQRITKRQKLKNALAYQRLGLEAPSDSLLLVERPEADDAETSDEDGDDAPRARTMTV
PNAKTKARGAEGLRRPLSPSDEDSEEAVEDGETDAGAAPAGMSLEEQRSAAQAIRQELGL
AEDAAATEERRGSHAHAGPAPFVRVVRSQAMQDARSGLPILGMEQEIMEAVAENDVILLC
GETGSGKTTQVPQFLYEAGYGSSQFLDRAGRIGVTQPRRVAAIAAAQRVAQELSTPIGAT
VGYQVRYDKKVGPGTAVKFMTDGILMRELQADFLLRDYSVLVLDEAHERSLNTDLLLGLL
SRMLPLRNKLAAEKPDILPLKLIIMSATLRVEDFAANSDLFKTPPPIVRVPARQYPVTIH
FARRTELHDYVGNAFGKVCQIHERLPPGGILVFLTGQREVEYLCRRLRSKYDPKHSAAQP
AGRHDAGPGTDARQAADAFGADEAEEQGDVDFEGRDAVHDDFEMEEALEDEEDVVIMGGD
GFTPEQIAAAEARLNAQLGTKLGALKGAEESDGPGKVHVLPLYAMLPRSAQAAVFGAVPE
GARLIVVATNVAETSLTIPGVRYVVDAGRAKEKVMDSHGAASKYEVSWISKASAEQRTGR
AGRTGPGHSYRLYSSAHFHDNFPQHGDPEVLRTPLEGVALVMKAMGIDKVTNFPFPTPPD
RAALAAAQTCLQALGALDSQGALTDLGKAMAVLPLNPRPSRMILQASTSPVAKETSASKK
RSGGALTYAVALAAIISVESPFVHIDGIAAQEGESEDSMKRRRQSAKSAHNRLRVARSDV
LSALAAFCAYVNAPDREGFCRDTYLHSRNLREACALHRQLVHLLQQMGDKIGAFCAGTAM
QDLLRSADTLDKPSPTVLMQLQRAIAAGWADQISRRVHSIEYVQEHSTSNKGRGRAVRYT
PNALDEQVFMHPQSAMAKAAPEFVAYTQIVRTEKRPYMTGVTEVEAGWLSTVAEPLVQLS
APQDDPAPHYSRAADAVVATHAITFGRHGWPLPSVEKPLLDKTLQARFFAAALLAGRVLP
ALEELRDVLAASPAKAAAAESQGERRVGELVGALARRQVCSRRQLAAQWSEDADFLRPEL
GAWLRKGQTGRLDNIWARLHEEVLQERNK
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcaagcgagagcgaaagcagaagggaaacgcaactaagaccctcaagcgcaaa
gccacagctgtggaaggatcgcaatccttggatgttgacaacaccgatgcagaacaggat
gcgaggttgggcagcacaccagacgacagcaatgccgtttttttgatgccaaagccaaag
aaggaggacactggagccgcagaagatgcagccgttgcgcgcgagctgagcaaagctcaa
aagcgcaagttgaagaaggtccaagaggagaaggaaaagcgggtagagcgcaggaaggtt
ttggcgtcccttgcggaacatgagctgcccagcgagcacctagcactcatgcagtcgaca
gcacggcgtggacagaggataaccaagcggcagaagctgaagaatgcactggcgtatcag
cggcttggcctggaggcaccctcagactccctgctccttgtggagcgcccagaagctgat
gatgctgaaacgagcgatgaggatggcgatgatgcaccacgtgcgcggacaatgacagtg
cctaatgcaaagacaaaggcacggggtgccgaaggcctcaggcgtcctcttagtccctct
gatgaggacagcgaagaggcggttgaagatggggaaactgatgctggagctgcaccggca
ggcatgtctcttgaggagcagcgcagtgcagcccaggccattcggcaggagctgggcctg
gcagaggacgccgctgcaacggaggagcggcggggttcgcatgcgcatgccgggccggcg
ccgtttgtgcgcgtggtgcggtctcaggcgatgcaggacgcgcgcagcggcctgcccatc
ctgggcatggagcaggagatcatggaggccgtggctgagaacgatgtcatcctgctctgc
ggagagacaggctccggcaaaacaacgcaggttccgcagtttttgtacgaggcgggctat
ggcagcagtcagttcctggacagggctgggcgcattggcgtgacccagccgcgcagagta
gcggccattgctgctgcacagcgcgtggcgcaggagctgagcactcccatcggcgccact
gttggctaccaggtgaggtacgacaagaaggtgggcccggggacagccgtgaagttcatg
acggatggtatcctgatgcgggagctgcaggctgacttcctgctgcgcgactacagcgtc
ctcgttcttgatgaagcccacgagcgcagcctaaataccgacctgctccttgggttattg
tcgcgaatgttgccactgcgcaacaagcttgccgccgagaagccagacattctgccgctc
aagctgatcatcatgagtgccacgctgcgcgtggaggactttgccgccaactctgacctg
ttcaaaaccccgccccctatcgtgcgggtgccagcgcgacagtacccggttacaatccac
tttgcgcgccggacagagctgcatgattatgtcggaaacgcctttggcaaggtgtgtcag
attcatgagcgcttgccgccaggagggatcctggtgttcctcactgggcagagggaggtg
gaatacctctgccgcaggctgcggtcgaaatatgatccgaagcacagtgcggctcagcca
gcagggcgccatgatgctggaccagggacagatgccaggcaggctgcagatgcctttggt
gctgacgaagcagaggagcaaggagatgttgactttgaggggagggatgcggtgcatgac
gattttgagatggaggaagctctggaagatgaggaggatgtggtgataatgggtggggac
ggcttcactcccgagcagattgcagccgcggaagcgcgcttgaatgctcagctggggacc
aaactgggggcgttgaaaggagcggaggagtcagatggtcccgggaaggtgcatgtgctg
ccgctatatgccatgctgcctcggtcggcccaggctgcggtctttggggcagtgccggag
ggtgcccgcttgatagtcgttgccaccaatgtggctgagacatcgctcaccatcccaggt
gtgcggtatgtggtggatgccggtagggccaaggagaaggtgatggactcacatggggca
gcatcaaagtatgaggttagctggatcagcaaggcatccgcagagcagcggaccggccgc
gctggccgcactgggcccggccactcctacaggctgtactcgtcagcgcatttccacgac
aatttcccacagcatggagaccctgaggtgctgaggacgccgcttgagggagtcgccctg
gtcatgaaggccatgggcatcgacaaggtcacgaacttcccctttcccacgccgccagac
agggctgccctggctgccgcgcagacttgcctgcaggctctgggagccttggactcgcaa
ggagcgctcacagacctgggcaaggccatggctgtgctgcccctcaacccccgcccatct
cgcatgatcctgcaggcaagcacctcacctgtggcaaaggaaacatcagcttccaagaag
cgctctgggggtgcacttacctacgctgtggctctggcagctatcatcagcgttgagagc
ccttttgtccacattgatggtattgcggcgcaggagggagagagtgaagacagcatgaaa
aggagacggcaatcagcaaagtctgctcacaaccgcctgcgcgtggcgcggagcgatgtt
ctgagtgcgctggcagccttctgtgcatatgtgaatgcgcccgacagggagggcttctgc
agggatacatacctgcactcgcgcaacctgcgcgaagcctgcgccctgcacaggcagctg
gtccacttgctgcagcagatgggcgacaagattggcgccttctgtgccggtacggcgatg
caggaccttctcaggagtgcggacaccctcgacaagccgtcccccacagtcctcatgcag
ctgcagcgcgccatcgcggcaggctgggccgaccagatttcccgccgcgtgcactccatt
gagtatgtgcaggagcactcgaccagcaacaagggccgcggccgtgccgtgcggtacacc
ccaaatgcgctggacgagcaagtgttcatgcacccacagtcagcaatggccaaggctgct
cccgagttcgtggcctacacacagatcgtgcggacggagaagcgcccctacatgactgga
gtaaccgaggtggaggctggctggctatcaaccgttgcagagccattggttcagctgtct
gcgccacaagatgatccagcacctcactacagccgggcagcagacgctgtggttgccaca
catgcaatcacctttgggcgccacggctggccgctgccttctgtagagaagccgctgttg
gacaagacactgcaggccagattctttgctgctgccctgctggctgggagggtgctgccc
gctcttgaagagctgcgggatgtgctggcggcgtctccggccaaggcggcggcagctgag
agccagggtgagcggcgggtgggtgaattggttggagcactggcgaggcggcaggtttgt
agcagacggcagctggcagcgcagtggagcgaagacgctgacttcctgcggcctgaattg
ggggcctggctgcgaaaggggcagacgggccgcttggacaacatttgggcgcgcctgcat
gaagaggttctgcaggaaaggaataagtga
DBGET
integrated database retrieval system
