KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_65653
Entry
COCSUDRAFT_65653  CDS       T02914                                 
Name
(RefSeq) RNA-binding domain-containing protein
  KO
K12831  splicing factor 3B subunit 4
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_65653
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_65653
Spliceosome [BR:csl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    COCSUDRAFT_65653
 Complex B
    COCSUDRAFT_65653
 Complex C
   U2 SnRNP specific factors
    COCSUDRAFT_65653
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5 OST3_OST6 Nup35_RRM_2
Other DBs
NCBI-GeneID: 17041926
NCBI-ProteinID: XP_005648472
JGI: 65653
UniProt: I0YZV9
LinkDB
AA seq 358 aa
MASVAGGRITAGVGANLIGQHAQDRNQDATVYVGNLDVQLSEELVWELFVQSGPVVNVYL
PKDRVTSQHQGYGFVEFKSEDDADYAIKILNMIKVYGKPIRVNKASQDKKTQDVGANLFI
GNIDPDVDEKLLYDTFSAFGMIIQTPKIMRDPETGATKGFGFVSYDSFEASDAAIEAMNG
QFLCNRPITVSFAYKKDTKGERHGSEAERQLATQQRTKAAAASRPHTLFASGPRQRPDGG
LAPSDDNVPGPPPPPPAPGAPGMMYPGGPPMPMQMPGSGPPQWAPPQQQYGGPPRPPPWA
GQPGGPPPPWGQPGPPMGMPPPPMGYAPGRPPPPPGYGMPPPGWQPHMPPPAPQAPPQ
NT seq 1077 nt   +upstreamnt  +downstreamnt
atggcgtcagtagctggcgggcgaattacagcgggtgttggtgccaatctcattggccag
catgcccaggataggaatcaggatgcaaccgtgtatgtgggcaacctcgacgtgcagctg
agcgaggagcttgtgtgggagctctttgtgcagtctgggcctgttgtcaatgtctacctt
ccaaaggatcgtgtgaccagccagcaccaaggctatggctttgtggaattcaagagcgag
gacgatgctgactatgcgatcaagatcctgaacatgatcaaggtgtatggcaaaccaatt
cgagtgaacaaggccagccaggacaagaagactcaggatgttggggccaacctgttcatt
ggaaacattgaccccgatgtcgatgaaaagctgctctatgatacgttcagcgccttcggc
atgatcatccagacaccaaagatcatgcgcgacccggagaccggcgcgactaaaggcttc
ggctttgtgtcctatgacagctttgaggcgtctgatgcagccattgaagccatgaatggc
cagtttctctgcaacaggcccatcacggtatcgtttgcgtacaagaaagacacgaagggc
gagcggcacggctctgaagcagagcggcagttggcgacacagcagcgcacaaaggcagct
gctgccagccggccgcacacgctgtttgcgtccgggccccgccagcgtccagacggcggc
ctggctccctcagacgacaatgtgcccggaccgccgccgccaccaccagctcctggcgcc
cctggcatgatgtacccaggaggccccccgatgccaatgcagatgccgggatcaggcccc
ccgcagtgggcgccaccgcagcagcagtatggtgggccgcccaggccccctccctgggca
gggcagccgggcggacccccccctccctggggccagcctggccccccaatgggcatgccg
ccaccgccgatgggctacgcccccggccggccgccgccgccccccggctacggcatgcct
ccccctggctggcagccgcacatgccgccacccgcgccgcaggccccgccgcaatag

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