Coccomyxa subellipsoidea: COCSUDRAFT_66096
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Entry
COCSUDRAFT_66096 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03013
Nucleocytoplasmic transport
csl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSUDRAFT_66096
03015 mRNA surveillance pathway
COCSUDRAFT_66096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_66096
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
COCSUDRAFT_66096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
17041777
NCBI-ProteinID:
XP_005648329
JGI:
66096
UniProt:
I0YZG6
LinkDB
All DBs
AA seq
406 aa
AA seq
DB search
MAKKNKDAKEASPSGSDSGSGSSSSGSSSSGTSSGSSSSDSASRSPSPAPQSKAKAKAND
WDEEAADLPPPPKRSEAAAEKGVGKGKDADEAMPDAMLKAKSKAAEPRDVDKDAAPKANG
RATSPVTTRLHVGHLTRNVTEDHIKEIFSTFGAIKSVELSVDKVVNLPRGFAYVEYKDRD
EAEKARVHMDGGQLDGNVLSVQFVLVPRKRTPPPAPLPGPPPKRPASPRRDRERGADRDR
PRRDDDRRPERPRPQRLPSPPRRRGASPLPYRRQASPPRGRRGRVEGSNYATTGVMTYLA
HTMQAAIAAAPQAEPGPPQGGLPPAEAPVPHAPAPQAAPLATAAPPLVPRPPPHPLTSSQ
GCEVTATKAASARRGLLHFWVVIVRGLQPVWQPIQQFKERLGARAR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaaacaaagatgccaaagaggcgagcccttctggatccgacagtggttca
ggttctagttcgtctgggtcctcatcttcagggacaagttccggaagttcctcgtcagat
tcagcatctaggagcccgtctcctgctccccagtctaaagccaaagcaaaggcaaatgat
tgggatgaggaggcagcagacctgccgccaccgccaaagcgcagcgaggcagcagctgag
aagggggtaggcaaggggaaggatgctgatgaggcgatgccagatgctatgctaaaggct
aagtccaaagcagcagagccaagggacgttgacaaggatgctgcaccaaaggcgaatggc
cgggcaacaagtcctgtcacgacacggctgcatgtgggtcacttgacaaggaatgtgaca
gaggatcacatcaaggagatcttctccaccttcggcgccatcaagtctgtggagctgtca
gtcgacaaggtggtgaatcttcctaggggttttgcatatgtggagtacaaggaccgggat
gaggccgagaaggcgcgtgtgcatatggacggcggccagctggacgggaacgttctcagc
gtgcaatttgtgctggtgccgcgcaagcgcacgccgccgccggcgccgctgccagggccg
ccgccaaagcggccggcctcgccgcggcgggaccgggaacgcggcgcagaccgggaccgc
ccgcgccgcgacgacgaccgccgcccggagcggccgcggccgcagcggctgccgtcgccg
ccccgccgtcggggggcctcccctctcccctacagacgccaggcctccccgcctcggggc
cgccgagggagggtggaaggtagtaattatgcaacaacaggggtgatgacgtatcttgcg
cacaccatgcaggccgccatcgccgccgcgccgcaggccgagcccgggccgccgcagggg
ggcctcccccccgcggaggcgccggtcccccacgcccccgcgccgcaggcggcccccctc
gccaccgccgcgccgccgctcgtcccccggccgccgccgcacccgctcacctccagccaa
ggctgcgaggtcaccgccaccaaggcggccagcgcgcggcgaggactcctccacttctgg
gtcgtcatcgtccggggcctccagccggtctggcagcccatccaacagttcaaagagcga
ttaggcgccagggcacgctga
DBGET
integrated database retrieval system
