Coccomyxa subellipsoidea: COCSUDRAFT_66679
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Entry
COCSUDRAFT_66679 CDS
T02914
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12874
intron-binding protein aquarius
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSUDRAFT_66679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_66679
Spliceosome [BR:
csl03041
]
Complex B
Other components
Prp19-related factors
COCSUDRAFT_66679
Complex C
COCSUDRAFT_66679
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
ResIII
UvrD_C_2
UvrD-helicase
AAA_16
DEAD
AAA_22
AAA
SLFN-g3_helicase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
17039756
NCBI-ProteinID:
XP_005646315
JGI:
66679
UniProt:
I0YTQ2
LinkDB
All DBs
AA seq
1560 aa
AA seq
DB search
MGASLTLEEIAADQLTKVAEENWSNAARSKAKPPAFRPELVVEVYKRELGGSSVHPPKLK
RVMLLEISQYLENYLWPHFDAATASHAHVMSILAMVKEKFRENVPAWDGFAGGPSEKFAA
FFGAVLALRENSTGWETHERVTYLLFVIHCFQSLEQEAVRKQALQLVSLPLWHALSRGRL
QLELGANETLAKHWKRLAKKEAAAAKAAAEDGTAGDAKSAHVPVTERPEATFLPSLLDEF
LEMLQSVVPPEVATANGAGGDARLDRQRLLYCERFAELLIDLLSQLPTRRFVRTLLEDKA
ILIKARMSSLFTHPEGQLYRQLVDLFQFYQYFPIDDQSGEPLSDAAVVAAQYERLTQFQR
LLFKHHPQLRELALANCGTLQKRSVLQPALTGLDKDQLSKLVTKQLRLVAEDDPWAEDPE
FLAEVVISRYERQRSQTEVVNAMPLYPTEAILWDDNQVPQVHYTGETCLALPKLNLQFLT
AHDYLLRNFSLFRLEATYEIREDIADVLSRVSASWEETDDGEERVAFRGWARMALPLQAF
NVVEVRKPRVGENKPAAVTADITLDTSKLRGDVRGEWDDMKQHDVVFLLTVRPPDQATLR
MMRSDGAELSPADTYGLVYVRGAEVIEVKDEDGRLMNDFTGRIKRDEWKPPSGFQRTLTV
ALDTAQYQIDMESMAAHKSEDVYSSFNILMRRKPKLESMAAHKTEDVYSSFNVLMRRKPK
ENNFKAVLESIRDLMNEETVLPDWLHDIFLGYGDPAAAQYSQLPASYLRTLDFKDTFLDA
EHLRDSFPGYTLDIRNASGGPDPVRPFRITFPPLPAPEAAKAKGKRKAAGAAAAEAADAK
TLIAESYAPPDPGPYPQDKPPENQVRFTPVQVEAIKAGTQPGLTMVVGPPGTGKTDTAVQ
IMHVLYHNCPDQRTLLIAHSNQALNDLFEKILQRDVPARYLLRLGMGEAELATTLDFSRV
GRVNAMLARRLELLAEVEQMAKHFGVAEDVSYTCETAAHFWLLHVLARWEKFLASVRTKK
TPECVKELFPFKEYFADAPGVLFTGEDYVADMERAKGCWRHLRTMFQELEECRAFELLKG
QADRVNYLMTKQAKIVAMTCTHAALKRREFMDLGFKFDNLLMEESAQILEIETFIPMLLQ
NQEDGVARLKRVILIGDHHQLPPVVKNMAFQKYSHLDQSLFTRFVRLGTPYVQLNAQGRA
RPSLAQLYNWRYKDLGDLPNVLTGPDFLRANAGFAYDYQFVDVGDYQGQGESTPVPHFYQ
NLGEAEQVVAVYQYMRLRGYPADKISILTTYNGQRALISDVIESRCARHPAFGRPLKVTT
VDKYQGQQNEYVLLSLVRTRAVGHVRDVRRLVVAMSRARLGLYVFGRLSLFANCYELAPT
MRLFCERPTQLALHPTEYWQSCERGVEDVGQPLLIAGRENMARLVAAMTREWEVATHNAT
LAAQQAAVLAAGPRPPAVPYPAGAGAAAGADETAGPASTADTDAEEPKVGDVVMGEVEVT
DLVQIEDKPEQAKAGMAAGPAAAGGADSGAEEPRVSNVVKGEMEVTDSVPIEDKPEQSKA
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgggagcctccctcacgctcgaagagattgcagcggatcaactcacaaaggttgcggag
gagaattggtccaacgcagcgcgcagcaaagcaaagccgcctgcattcaggccggagctg
gttgtggaagtgtacaagagggagctggggggaagcagcgtgcacccgcccaagctgaag
cgggtgatgctgctggagatctcgcagtacctggagaactacctctggccccactttgac
gccgccaccgccagccacgcccatgtcatgtccatcctggccatggtgaaggagaagttc
agagagaacgtcccggcatgggacggctttgcgggggggccctcggaaaagtttgcggca
ttttttggcgcggtgctggcgctgagagagaactccacgggctgggagacgcacgagcga
gtcacctacctgctcttcgtcatccactgcttccagagcctggagcaggaagccgtgcgg
aagcaggcgctgcagcttgtgtccctgccgctctggcatgccctctcacgggggcgcctg
cagctggagctaggcgcgaatgagacgctggcaaagcactggaagcggcttgcaaagaag
gaggcggcggccgcaaaagctgcggcggaggacggcacggccggggacgccaaatcggcg
catgtgcctgtgactgagcggccggaagcgaccttcctgccatcgctgctagatgagttc
ctggagatgctgcagtcagtggtccccccggaggtggccaccgccaacggagcggggggc
gacgcgcgcctggacaggcaacggttgctctactgcgagcgcttcgctgagctgctgatc
gacctgctgagtcagctgcccacccgccgcttcgtgcgcactctcctggaggacaaggcc
atcctcataaaggcccgcatgtcgtccctcttcacgcaccccgaagggcagctgtaccgg
cagctggtggacctgtttcagttctaccagtacttccccatcgacgaccagagcggcgaa
cccctctcggacgcggccgtggtcgccgcgcagtacgagcgcctaactcaattccaacgc
ctgctcttcaagcaccacccgcagctgcgcgagttggcgctggcaaactgtgggacgctg
cagaagcgatcggtgctgcagcccgcgctgactgggcttgacaaagaccagctctccaag
ctcgtcaccaagcagctcaggcttgtggcggaggatgatccgtgggcggaggaccccgag
tttttggcggaggtggtgatcagccgctacgagcgccagcgaagtcagacagaggttgtc
aatgcgatgccgctgtacccgacagaagccatcctgtgggatgacaaccaggttccccag
gtgcactacacaggcgagacgtgcctggcgctgcccaagctgaatctgcagttcctgacg
gcgcacgactacctgctgcgcaacttcagcctcttccgcctcgaggccacctacgaaatc
cgcgaggacatcgccgacgttctctcgcgcgtgtccgcctcctgggaggagactgacgat
ggcgaggagcgggtggcgttccggggctgggcgcgaatggcgctgccgttgcaggcattc
aacgtggtcgaggttcgcaagccgcgcgttggcgagaacaagccggccgccgtcaccgct
gacatcaccctcgacacctccaaactgaggggcgacgtgcgaggggaatgggacgacatg
aagcagcacgacgtggtctttctgctgactgtacggccgccagatcaggcaacacttcgg
atgatgcgctcggacggcgctgagctgtcgcctgccgacacctacgggctcgtgtacgtc
aggggtgccgaagtcatcgaggtgaaggacgaggatgggcggctgatgaacgatttcacg
ggccgcataaagcgcgatgagtggaagccgccctcgggttttcagcgcacgctgaccgtg
gcgctcgacacggcgcagtaccagatcgacatggagtccatggccgcgcacaagagcgag
gacgtctactcgtcgttcaacatcctcatgcgccgaaagcccaagcttgagtccatggcc
gcgcacaagaccgaggatgtctactcgtcgttcaacgtcctcatgcgccgaaagcccaag
gagaacaacttcaaggcggtgctggagagcatccgggacctgatgaacgaggagacggtg
ctgccggactggctgcacgacatcttcctcggctacggcgacccggccgcggcccagtac
agccagcttcccgcctcctacctgcgcacgctcgacttcaaggacaccttcctggatgcg
gagcacctgcgcgacagcttcccggggtacacgttggatatccgcaacgcgagcggcggc
cccgaccctgtgcggcccttccgcatcaccttccctcccctgcctgcccccgaggccgcc
aaagccaagggcaagcgcaaggcggctggcgcggctgcggcagaggcggccgatgcaaag
acgctgatcgcggagtcctacgcgccgcccgaccccggcccttacccgcaggacaagcct
cctgagaaccaagtcaggttcacgcctgtccaggtggaggcgataaaggcggggacgcag
ccggggctgacgatggtggtgggtccccccggtacgggcaaaacggacactgccgtgcag
atcatgcacgtgctctaccacaactgccccgaccaacggaccctcctcatcgcacactcc
aaccaggcgctcaatgacctgtttgagaagatcctgcagcgcgacgtgccggcgcggtac
ctgctgcggctgggcatgggcgaggctgagctggcgaccacgctcgacttctcgcgcgtc
ggccgagtcaacgccatgctcgcacgccgcctcgaactgctcgccgaggtggagcagatg
gccaagcactttggcgtggcggaggacgtatcttacacctgcgagacggccgcacacttc
tggctgctgcacgtgctggcgcgctgggagaaattccttgcctccgtgcgcaccaagaag
acgcccgagtgcgtcaaggagctctttccgttcaaggagtacttcgcagacgcgccgggg
gtcttgtttacgggcgaggattacgtggctgacatggaacgcgcgaagggatgctggcgc
cacctgcgcaccatgttccaggagctcgaggagtgccgcgcttttgaactgctcaagggc
caggcggaccgagtgaactacctgatgacaaagcaggccaagatcgtggcgatgacatgc
acgcacgcagcgctgaagcggcgcgagttcatggacctgggcttcaagtttgacaacctg
ctcatggaggaatcggcgcagatcctggagatcgagacattcatccccatgctgctgcag
aaccaggaggatggagtggcgaggttgaagagggtgatcctgataggggatcaccaccag
ctgccgccggtggtcaagaacatggccttccagaagtacagccacctagaccagtccctc
ttcacccgcttcgtccgcctcgggaccccctacgtccagctcaacgcccaggggcgggcg
cggccgagcctggcccagctgtacaactggcgctacaaggatctgggcgatctgcccaac
gtgctgactggaccggacttcctccgcgccaacgccggcttcgcgtacgattaccaattt
gtcgacgtgggcgactaccaggggcagggggagtccacccctgtgccccacttctaccag
aacctgggggaggcggagcaagtggtggcggtgtaccagtacatgcggctgcgcggctac
ccggccgacaagatctccattctgacaacgtacaacggccaacgcgcactcatttcagac
gtcatcgagtcccgctgcgcccgccaccccgccttcggccggcccctcaaggtgacgacg
gtggacaagtaccaggggcagcagaacgagtacgtgctgctctctctcgtgcgcacgcgc
gcggtagggcacgttcgcgacgtgcgccggttggtcgtggcgatgagtcgtgcgcggctg
ggcctgtacgtcttcgggcggctgtcgctgtttgccaactgctatgagctggcgccgacc
atgcgcctcttctgcgagcggcccacgcaactggcgctgcaccccaccgaatactggcag
agctgcgagcggggagtggaggacgtgggccagccgctgctgatagccgggcgggagaac
atggctcgactggtggccgccatgactcgagagtgggaggtcgccactcacaacgccacc
ctggctgcccagcaggcggcagtgctcgctgccgggccgcggccgccagcggtgccgtac
ccggccggggccggcgcagcggctggcgccgatgagacggctgggccggcctcaaccgcg
gatacggacgccgaggagccgaaggttggagatgttgtcatgggcgaagtggaggtcacg
gatcttgtgcagatcgaagacaagccggagcaagcaaaggccggcatggcggccggcccg
gccgccgcggggggcgcggattcgggagcggaggagccgagggtcagcaatgttgtcaag
ggcgaaatggaagtcacggattctgtgccaatcgaggacaagccggagcaatcaaaggcg
tag
DBGET
integrated database retrieval system
