KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_67112
Entry
COCSUDRAFT_67112  CDS       T02914                                 
Name
(RefSeq) GTP-binding protein YPTC1
  KO
K07874  Ras-related protein Rab-1A
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csl04131]
    COCSUDRAFT_67112
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csl04147]
    COCSUDRAFT_67112
   04031 GTP-binding proteins [BR:csl04031]
    COCSUDRAFT_67112
Membrane trafficking [BR:csl04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    COCSUDRAFT_67112
 Autophagy
  Other autophagy associated proteins
    COCSUDRAFT_67112
Exosome [BR:csl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   COCSUDRAFT_67112
  Exosomal proteins of other body fluids (saliva and urine)
   COCSUDRAFT_67112
  Exosomal proteins of colorectal cancer cells
   COCSUDRAFT_67112
GTP-binding proteins [BR:csl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    COCSUDRAFT_67112
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase GTP_EFTU MMR_HSR1 SRPRB Gtr1_RagA FeoB_N AAA_7 ABC_tran LANC_like AAA_5 AAA_22 AAA_16 Dioxygenase_N AAA_29 DUF3873 TniB
Other DBs
NCBI-GeneID: 17039157
NCBI-ProteinID: XP_005645719
JGI: 67112
UniProt: I0YS06
LinkDB
AA seq 202 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYANENVNKLLVG
NKSDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVIN
KPGATIRPGEGKPVNSSKSSCC
NT seq 609 nt   +upstreamnt  +downstreamnt
atgaacccagagtacgattatctctttaagctcttgctcattggagactcgggggtgggc
aagtcctgcttgctgcttcggtttgcggatgatacatacaccgagagctacatctctacc
atcggcgtcgattttaaaattcggaccgtcgagcttgacggcaaagtgatcaaactccag
atctgggacacggctggtcaggagcgctttcgtacaatcacaagcagctactaccgggga
gcccatggaatcattgtcgtgtacgacgtcacagatcaggagagcttcaacaatgtcaag
caatggctgaacgagattgacagatatgccaatgaaaatgtgaacaagctgctggtgggc
aacaagagtgatttgacagcgaagaaggtcgtggactaccagacagcaaaggcctttgca
gatgagattggcatcccattcctcgagaccagtgccaagaacgcgaccaatgtggagcaa
gctttcatgaccatggcggccgagatcaagaacaggatggccagccagcccgtcatcaac
aagccaggcgccaccatcaggccaggcgagggcaagccggtcaactccagcaagtccagc
tgctgctga

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