Coccomyxa subellipsoidea: COCSUDRAFT_67456 Help Entry COCSUDRAFT_67456  CDS       T02914                                  Name (RefSeq) hypothetical protein   KO K06100   symplekin Organism csl  Coccomyxa subellipsoidea Pathway csl03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     COCSUDRAFT_67456  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csl03021]     COCSUDRAFT_67456    03019 Messenger RNA biogenesis [BR:csl03019]     COCSUDRAFT_67456 Transcription machinery [BR:csl03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      COCSUDRAFT_67456 Messenger RNA biogenesis [BR:csl03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      COCSUDRAFT_67456     U7-dependent histone pre-mRNA processing factors      COCSUDRAFT_67456 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N INTS1_R4 Motif Other DBs NCBI-GeneID:  17038021 NCBI-ProteinID:  XP_005644596 JGI:  67456 UniProt:  I0YNT3 LinkDB All DBs AA seq 1390 aa AA seqDB search MSEADRNQAIQLLNDAKMASDASQKALISPLDANVDLLKGLTELIVHKQPALLSEFLPEV VLLQTEPAVPVRKQLVELLEAAVRAQPSLAALHAVLCTLRQLLDDSSPAVVRRAVAACSI AFRGPMVPPDVAAVWEACGGIRQRVSQLAGEPVSDGVRFAALKFMEFVIMLVTAESAPKG ALALANHALLNPAQVARDAETLLLQLLGMVKQSALANLPGSVAIVAVKAVGSLAAHRPQY LGRVLPTLLSAASANSSSSGDDRNGVAASVDRAVKDSLMSVLRCKAPQALPWQRKIVAAL HALGAGEQADAEVRRSERQAKRERARQDEDSNGSAKRQRLPSAEPAQPQPAVVQPLPQPT PQIPQYEPSMLLRLLHECPGHTPERDLREVLAVMAVLAAENDLTTLKAFVAELSDAVLAD AVIANLDHLPRREDVCDGVPAPAAGLGGLAGLLQGLTEPGEPVQQQPAAAPKQEPPEVQP QPKAAPQPLAAPRQLALRRAQLPVLKLEPLALTQQQQGTLRLDAVGRVLGAEAAPVQHLR ASVLASLATRAPVGDLAADMVLQHLLGSFHQPKSYDLALKWLYRLFVANAGIGVTSAAKA AASAHITQPERKAALASALDDDMAMTSADDNANSGALIAGSQDEVMADAAPPEQATEPEQ PETQDAAESSGRELAVREEDGGSEGDGNWAAALVDSPYEIVLLAMLEGLREQQTDPKDRT IAKLLMEAPALPQPAIAHFLADVAGGGDEWANLSLQAARDIIMGRPNDRAPVLDMVLSTA TAQDEDMRSKAVRLTANRLYQETFLQDAIEQFALAKLRELETPPQQELPAASQPLALENG SAALVLSAAPVPDQAPSAEKVTPPETSSAAPDQAPAAAEGTPSENGSAAPDQATSAGSDP AIGSSGSAPQEDSRKQKSEAASKGAEGSKQQKSGEAPTGAITENGGEHESASGGDGVKDA GRGERSEGSQGPQNKGGVSKEDEGVSHAADDTTARRESGSLATTSGKEAVSVSGREKSVH RGNAANAAGAAQGIAALVEAAAQDYIGSVEDAQSRCDLFCALCTKKPELLHQLMQVYGKA AEAARAAIRERAPGLARVIGAASPVLVGLLRQRPPPGSLPLLLSMLHTLTESKPPPASLV GACMEALKRSKDVRFLVPALGGLTRQEALMHLPKLLSLKDAAGFTAGLQRLLLPQPETGE PLLAPQEILVAILSLKKDSLPLKQHAGGLTACLTMKLPDGAPAFPPKSLASTLQQLVVRK PLPFLFMRFTIQANAASRELRGFVLEILSMLVGQAVWADSQQWQGWIVCVRELLPDSLPV LLQLPLRNLGLALDKLPAKVATQAAEFVSSDRCGPLPRQTLALVQERAAAVEAAAAKQAA EPAQAAEPAA NT seq 4173 nt NT seq  +upstreamnt  +downstreamnt atgagcgaagccgacaggaaccaagccattcagttgctcaacgatgcaaagatggcgtcc gacgccagccagaaggcactgatctctcctttggatgcaaacgtggacctcctgaagggc ctgacagagctcattgtccacaagcagccagcactgctatcggagtttttgccagaggtg gtgctgctgcaaacagagccggcagtgccggtgcggaagcagctggtggagttgctggaa gctgccgttcgcgcgcagcctagtctggccgccctccacgctgtgctgtgcacgctgcgt cagctgctggatgactcatcgcccgctgtcgtgcgccgtgctgtcgccgcatgctccatc gcttttaggggtcccatggtcccccccgatgtggcggcagtctgggaggcctgcgggggg atccggcagagggtgagtcagctggcgggggagcccgtctccgacggcgtgcgattcgcg gcgctcaagttcatggagtttgtcatcatgctcgtcaccgctgagtcagccccgaagggc gcactcgcactcgccaaccacgccctcctcaaccctgcacaggtggcgcgcgacgcagag acgctcctgctgcagctgctgggcatggtgaagcagtctgcactggcgaacctccctggc agcgttgccatcgtggcagtcaaagccgtcggctctctggcagcgcaccgacctcaatac ctgggccgagtgctgcccaccctcctgtccgccgcctctgccaacagcagctcttccggg gatgaccggaatggggttgctgccagcgtggacagggcggtgaaagattcgctgatgtcc gttctgcgctgcaaagcaccccaggctctgccgtggcagcggaagatagtggcggcgttg cacgctctgggcgcgggcgagcaggcagatgctgaagtgcgcaggagtgaaagacaggct aagagggaacgcgcaaggcaggacgaagacagcaatgggtcagccaagcgccagaggctg ccctcagcagaacctgcacagccccaacctgcagtggttcagccattgccacagccgacg ccccaaataccgcagtatgagccgtcgatgctactgcggcttctgcacgagtgccctgga cacacgccggagagggacttgcgagaagttctggcagtgatggcggtcttagcggcagag aacgatctcacgaccctcaaggcattcgttgctgagctgtcggacgctgtgctggcggac gctgtcatcgccaatttagaccacctgccgcggcgggaagacgtctgcgacggcgttccc gctccagcggccggcctcggtggcctcgccggcctgctgcaggggctgacagagccaggt gagcccgtgcagcagcaaccggccgccgcgccaaagcaggaaccgcccgaagtacagcca cagccaaaggcggctccacaacccctggcagctccccggcagctggcgctgcggcgagcg cagctgccggtgctgaaattggaaccgctggcgctgactcagcagcagcagggaacgctg agactggacgccgtcgggcgagtcttaggagcggaggccgcccctgtgcagcacctgcgc gcgtctgtgctggcctcgctggccaccagggcgccggtgggtgacttggcggctgacatg gtactgcagcacctgctgggcagcttccatcagcccaagagctatgacctggcgctcaag tggctgtaccgcctgtttgttgcgaatgctggcatcggcgtgacatcagccgccaaggcc gccgccagcgctcacatcacccagcccgagaggaaggcagcgcttgcatcagctctggac gatgacatggcgatgacatcagcggatgacaacgccaattctggcgccttgatcgctggc tcacaggacgaagttatggcagatgctgcgccgccagaacaggcaactgagcctgaacag cccgaaacacaggatgctgcagaaagctccggcagagagcttgcggtaagggaggaagat ggaggttccgagggggacgggaattgggcggcggcgcttgtggacagcccctatgagatt gtgctactcgctatgctggaaggtctcagggaacagcagacggaccccaaggaccgcaca atagcgaaactgctgatggaagctccggcgctgccgcagccggccatcgcgcattttctg gccgacgtggccggtggcggcgacgagtgggcaaacctctcactgcaggcggcgcgtgac atcatcatgggccgtccaaatgacagagcccctgtcctggacatggttttgagcaccgcc acagcgcaggatgaagatatgaggagcaaggcggtgaggctgacagcaaaccggctgtac caggagaccttcctgcaggacgcaatcgagcaatttgcactggcaaagctgcgcgaactc gagacccctccgcagcaggagctgccggcagcttcacagccgcttgccctagagaatggc tcagctgcgcttgtcttgagtgcagctccggtgcccgatcaggcaccgtcagcagagaag gtgacgccgccggagaccagctcagccgcgccagatcaggcaccggcagcagctgaggga acgccgtcggagaacggatcagccgcgccagatcaggcaacatcggcagggtctgatcca gcaatcggcagctctggcagcgcgccgcaggaagacagcagaaagcaaaaaagcgaggct gcgagcaaaggggccgaaggcagtaaacaacagaaaagcggagaagctccaacaggagca atcacagagaacggcggtgagcatgaaagcgcgagcggcggtgatggcgtgaaggatgca ggcaggggggagaggagcgaggggagccaggggccgcaaaataaagggggtgtatcaaag gaagatgagggggttagtcatgcggcggatgacacaaccgctcgcagggagtctggcagc ctcgcaactaccagcggcaaggaagctgtctcggtgtcagggagagaaaagagcgtgcac aggggaaatgcggcaaacgcggcgggggcagcgcaggggattgctgcgttggtggaggcg gcagcgcaggattacataggcagcgtggaggatgcgcagagtcgctgcgatctgttctgc gcgctgtgcaccaagaagccggagctgctgcaccagctaatgcaggtctatgggaaggcg gcagaggcagcgcgcgcggcgatccgagagagggcgccggggctcgcgcgtgtgatcggc gcggcttcaccggtgcttgttggactcttgcgacagcgcccgccgccaggcagcctgcct ctcctgctcagcatgctgcacacactcacagagagcaagccacccccggcgagcctggtg ggagcgtgcatggaggctttgaagcgcagcaaggatgtgcgatttctggtgccggctttg ggcgggctgacgcggcaagaggcgctgatgcacctgccgaaactgctgtccctcaaggac gccgccggcttcactgccggcctacagcggctgctcctgccgcagcctgagaccggggag ccgctgctggcgccgcaggagatcctggtggccatactgagtttgaaaaaggactcgctg cccctgaagcagcacgcgggcggactgacggcctgcctgaccatgaagcttcctgacggc gcgccagcgttccctcccaagtccctcgcctcaaccctgcagcagcttgtggtcaggaag ccgctgccgttcctcttcatgcgcttcacgatccaggcgaacgcggcgtcgcgcgagcta cggggatttgtgctggagattctttcgatgctggtggggcaggcggtgtgggctgacagc cagcagtggcaagggtggattgtgtgcgtgcgcgagctgcttcctgactccctccccgtg ctgctgcagctgcccctgaggaacctaggcctggcgctagacaagctaccggcaaaggtg gcaactcaggctgccgaatttgtgagctctgatcgctgcggcccgctgccgcggcaaaca ctagcgctggtgcaggagagggcggctgctgttgaagctgcggccgcaaaacaggcggct gagccggctcaggctgccgagcccgctgcgtag

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