KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_8819
Entry
COCSUDRAFT_8819   CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    COCSUDRAFT_8819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_8819
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     COCSUDRAFT_8819
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     COCSUDRAFT_8819
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 17040220
NCBI-ProteinID: XP_005646778
JGI: 8819
UniProt: I0YV15
LinkDB
AA seq 168 aa
DRFGLLGLLGVIRMSDPDLTTLALGTDLTGLGLHLNSPENVYKTFASPWAEAPLRPEPDF
KVPECYRHAPPRLQAGYFTKFAQETLFYIFYSMPGDEAQLFAADELQHRGWAYHKEFKVW
LTAIQGVEPQQKNDQMERSSYYVFDTATWEAVRKDNFVLHYDAIERLP
NT seq 504 nt   +upstreamnt  +downstreamnt
gaccgctttggcctgctgggcttgctgggtgtgatccgcatgagtgatccggacctgacc
acgcttgcgcttggaacggacctcacggggctgggccttcacctcaactcccccgagaac
gtctacaaaaccttcgcttccccctgggctgaggcgcccctgcggcctgagcccgacttc
aaggtgccggagtgctatcggcatgcgccgccgcgattgcaggcgggctacttcaccaag
tttgcgcaggagacgctgttctacatcttctactccatgcctggtgacgaggcgcagctg
tttgcggcggatgagctgcagcaccgcggctgggcctaccacaaggagttcaaggtgtgg
ctgacggcaatccagggggtggagccgcagcagaagaacgaccagatggagcgcagctcc
tactacgtcttcgacaccgccacctgggaggccgtgcgcaaggataacttcgtgctgcac
tatgacgccatcgagcggctgccc

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