Campylobacter subantarcticus LMG 24374: CSUB8521_0126
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Entry
CSUB8521_0126 CDS
T03571
Symbol
ispA
Name
(GenBank) geranyl diphosphate synthase / farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csm
Campylobacter subantarcticus LMG 24374
Pathway
csm00900
Terpenoid backbone biosynthesis
csm01100
Metabolic pathways
csm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CSUB8521_0126 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csm01006
]
CSUB8521_0126 (ispA)
Enzymes [BR:
csm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CSUB8521_0126 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CSUB8521_0126 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
CSUB8521_0126 (ispA)
Prenyltransferases [BR:
csm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CSUB8521_0126 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
NOG1_N
Motif
Other DBs
NCBI-ProteinID:
AJC90027
UniProt:
A0A0A8H7U4
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All DBs
Position
106732..107580
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AA seq
282 aa
AA seq
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MILQKFKQHLEQNFPKAEGFHPFFNEALKWMLEAGGKHFRAQLLLGIVNVKNSTLLDKAL
NAALALEFIHTYSLIHDDLPAMDNASLRRGKQTLHKKYDETTAILVGDALNTEAFLLLSR
LDLKESVKLKLIETLAFNAGLGGMIIGQAIDCYFEDQLLNLEQVEFLHIHKTARLIAAAL
KMGCEICELDEKECEQIYEIGLLIGLVFQIKDDIIDATLDTQEVGKPTHNDLHKNSFVKL
LSLEGAKKAKDDKIALCEEKMKNLDSKLANELQILIDKYLKG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgattttgcaaaaattcaaacaacatttagagcaaaactttcccaaagcagagggtttt
catccttttttcaatgaggctttaaaatggatgctagaagctggtggaaagcattttaga
gcccaacttcttttgggtatagttaatgtaaaaaattctactttgcttgataaagcttta
aatgcagctttggctttggaatttatccatacttactctttaatacatgatgatttacct
gctatggataatgcttctttgcgtagaggaaaacaaactttacacaaaaaatatgatgaa
accactgctattttagtgggtgatgctttgaatactgaagcttttttactactttctagg
cttgatttaaaagaaagtgtaaaattaaaacttatagaaactttagcttttaatgcgggg
cttggtggtatgatcatcggtcaggcgattgattgttattttgaagatcagctgctaaat
ttagaacaagttgagtttttgcatattcataaaactgcaagattaatcgcagcagcttta
aaaatgggttgtgaaatttgtgagttagatgaaaaagaatgcgagcaaatttatgaaata
ggacttttgataggattagtttttcaaatcaaagatgatatcatcgatgcgactttagat
actcaagaagtaggtaagccaactcataatgacttgcacaaaaattcttttgtgaaactt
ttgagtttagagggtgctaaaaaggcaaaagatgataaaattgcattatgcgaagaaaaa
atgaaaaatttagattctaagcttgctaatgagcttcaaattttgattgataaatattta
aagggttaa
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