Campylobacter subantarcticus LMG 24374: CSUB8521_0245
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Entry
CSUB8521_0245 CDS
T03571
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon, sigmaF
KO
K02405
RNA polymerase sigma factor FliA
Organism
csm
Campylobacter subantarcticus LMG 24374
Pathway
csm02020
Two-component system
csm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CSUB8521_0245 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CSUB8521_0245 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csm03021
]
CSUB8521_0245 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
csm02035
]
CSUB8521_0245 (fliA)
Transcription machinery [BR:
csm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CSUB8521_0245 (fliA)
Bacterial motility proteins [BR:
csm02035
]
Flagellar system
Flagellar assembly proteins
Stator
CSUB8521_0245 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
UPF0122
GerE
HTH_24
TrmB
HTH_37
HTH_5
HTH_10
MarR_2
CT_C_D
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AJC90142
UniProt:
A0A0A8H844
LinkDB
All DBs
Position
215180..215866
Genome browser
AA seq
228 aa
AA seq
DB search
MQPHNAYASTLKKEQDDLVISYMPALRAMAFRLKERLPASIDVNDLISIGVEEMIKLSRR
YDKEQNDNFWGFARKRVNGAMLDYLRSLDVMSRSNRKIIKDIDAIVDEFYQDNEKEPDDE
YLAKRLNLEVEKVKEARAAHAISLVMPLDEQLNCFNDSNIIEQIEKEELIEKINAVLNEF
KEREKLVIQLYYYEELNLKEIAEILEISESRISQIHKRLLKKIRERLV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgcataatgcctacgcttctacgctaaaaaaagaacaagatgacttagttatc
tcttatatgcctgcattaagagctatggcttttagactcaaagagcgtttgccagctagt
attgatgtgaatgatttaatcagtataggtgtagaagagatgatcaagctttcacgccgt
tatgataaagaacaaaatgataatttttggggttttgcaagaaaaagagttaatggagct
atgcttgattatctaagaagtcttgatgtgatgagtagaagcaatagaaaaattatcaag
gatattgatgctattgtggatgagttttatcaagacaatgaaaaagaacccgatgatgaa
tatttagcaaaaagacttaatctagaagtagaaaaggttaaagaagcaagagcagctcat
gctatatcgcttgtaatgcctttagatgagcagttaaattgttttaatgatagcaatatc
atagaacaaatagaaaaagaagaattgatcgaaaaaatcaatgcggttttaaatgaattt
aaagaaagagaaaagctagtgattcagctttattattatgaagagttaaatttaaaagaa
attgcagagattttggagattagcgagtcgagaatttcgcaaattcataagcgtttgctt
aagaagattcgagaaaggctagtttaa
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