Campylobacter subantarcticus LMG 24374: CSUB8521_0505
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Entry
CSUB8521_0505 CDS
T03571
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
csm
Campylobacter subantarcticus LMG 24374
Pathway
csm03030
DNA replication
csm03430
Mismatch repair
csm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSUB8521_0505 (dnaX)
03430 Mismatch repair
CSUB8521_0505 (dnaX)
03440 Homologous recombination
CSUB8521_0505 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csm03032
]
CSUB8521_0505 (dnaX)
03400 DNA repair and recombination proteins [BR:
csm03400
]
CSUB8521_0505 (dnaX)
Enzymes [BR:
csm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSUB8521_0505 (dnaX)
DNA replication proteins [BR:
csm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSUB8521_0505 (dnaX)
DNA repair and recombination proteins [BR:
csm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSUB8521_0505 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_14
AAA_assoc_2
Sigma54_activ_2
AAA_5
AAA_24
RCF1-5-like_lid
AAA_30
AAA_16
AAA_19
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AJC90376
UniProt:
A0A0A8H8G7
LinkDB
All DBs
Position
complement(485825..487366)
Genome browser
AA seq
513 aa
AA seq
DB search
MLQALAVKYRPKNFNELVGQNTVSTSLKYALENNRLAHAYLFSGLRGSGKTSSARIFSRA
LVCEQGPSANPCGECSQCLASLNGSNIDIIEMDAASHRSLEDIQELIEQVKYAPSLARFK
IFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLKLPATVLSRTQHFRFKQISTH
DILNHLEWILEKENIDYEKEALKLIARSGNGSLRDTLTLLDQAIVYCQNDIQTQKITTML
GFLDPAKIEEFYQAILTNEKDKVLEFLKDFEDYEASNVIDEMIFFLKEAFFAKNNLFSML
IYERFFRILSRAKTMLHSSDNDSFVLCVMAFMLIEATYLKSIDEAIDTSDNLKPYDISKN
IQQQNLPSAQTAKDEKFNPYESLLKAIYKRDYDLAEVFKKTTQFISFEDDILNISSHAQD
EDRKILNNGFKLIKTLLHELFGEKAQIKIQKIETIDTQKLQDIFKTPIKQEVKSTPNLNE
HFENFKKDAKKYNSKDETKEALDKLFGTPSIQN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagcacttgctgttaaatacagacccaaaaattttaatgagcttgtaggacaa
aacacagtttctacaagcttaaaatatgcacttgaaaataatcgcttggcacatgcttat
ttgttttcaggactacgagggagtggtaaaacatcgagtgcaagaattttttcaagagcc
ttagtgtgtgaacaaggaccaagtgctaatccatgtggagaatgttctcagtgcctagct
tcacttaatggatccaatattgacattatagaaatggatgctgcaagccacagaagcttg
gaagatatccaagaattaatagaacaagtaaaatatgctccatcactagctagatttaaa
atttttattattgatgaagtgcatatgcttactccacaagcagcaaacgccctacttaaa
actctagaagaacctccaagctatgttaaatttatacttgcaacaaccgatcctttaaag
ctacctgcaacggttctttcaagaacacagcattttagatttaagcaaatttctactcat
gatatcttaaatcatttagaatggattttagaaaaagaaaatatcgactatgaaaaagaa
gctttaaaactcatagcaagaagcggaaatggatctttaagagatactctaactttatta
gatcaagccatagtatattgtcaaaatgatatacaaacacaaaaaatcaccacaatgcta
ggctttttagatccagctaagattgaagaattttatcaagctatcttgaccaatgagaaa
gataaagttcttgaatttttaaaagattttgaagactatgaggcaagcaatgtaatagat
gaaatgatattttttctaaaagaagcattttttgccaaaaacaatttattttctatgtta
atttatgaaagattttttagaatactttcacgtgctaagaccatgctgcattctagtgat
aatgatagttttgtactttgcgttatggcttttatgttaatagaagcaacctatctaaaa
agcattgatgaggctatcgatacaagtgataatctaaaaccatacgatatatcaaaaaat
atacaacaacaaaatttaccttcagcacaaactgccaaagatgaaaaattcaatccatac
gaaagcttattaaaggctatctataaaagagattatgatttggctgaagtttttaaaaaa
accacacaatttatctcttttgaggatgatattttaaatattagctcacatgctcaagat
gaagatagaaaaattctaaataatggatttaaactaatcaaaactctacttcatgaactt
tttggagaaaaagcacaaataaaaattcaaaaaatagaaaccatagacacgcaaaaatta
caggatatattcaaaacccctataaagcaagaagtaaaaagcactccaaatttaaatgaa
cattttgaaaattttaaaaaagatgctaaaaaatacaattcaaaagatgaaaccaaagaa
gctcttgacaagctctttggaaccccatctattcaaaattaa
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