Campylobacter subantarcticus LMG 24374: CSUB8521_0559
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Entry
CSUB8521_0559 CDS
T03571
Name
(GenBank) putative helicase, PIF1 family (DUF889 domain)
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
csm
Campylobacter subantarcticus LMG 24374
Brite
KEGG Orthology (KO) [BR:
csm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csm03032
]
CSUB8521_0559
03029 Mitochondrial biogenesis [BR:
csm03029
]
CSUB8521_0559
Enzymes [BR:
csm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CSUB8521_0559
DNA replication proteins [BR:
csm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CSUB8521_0559
Mitochondrial biogenesis [BR:
csm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
CSUB8521_0559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Herpes_Helicase
AAA_22
Viral_helicase1
UvrD_C_2
AAA_24
AAA_16
SH3_13
AAA_11
nSTAND3
AAA_5
TrwB_AAD_bind
NPHP3_N
AAA_14
AAA_18
CbiA
Helicase_RecD
IstB_IS21
AFG1_ATPase
RsgA_GTPase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AJC90417
UniProt:
A0A0A8H8W7
LinkDB
All DBs
Position
534780..536129
Genome browser
AA seq
449 aa
AA seq
DB search
MILSRLENFLRDNNIFLSGGAGVGKSFLTTELIRSYRAQGKIVVVLGSTALSVFNIGGVT
LHSFFAFKRCQNYDELYYEDRKQRDKLEKLKRILKQCDLLVIDEISMVSASLMEMIYYRL
SRSGFNGKILLVGDFFQLPPVVKYKENQTQNTLFQNTLYAFSSQAWNDLKFINLKLSIAK
RTLDKQFYEYLFFLRMGEVNKEMLNFFKKMLISSKNLLEYMDEYTLLCATNKKTNHINTE
KLNLLQGEESIFKAKAEKLDCALDDKTYEQWINGLNSLSELKLKIGVKIIFCVNNKEENY
YNGEQGVVLNFVKDKEQEYVLIEKNNGERLKLKPYEYTLEEYELDANEKLEIKIKAKFIQ
FPIKLAYAITIHKSQGMSIDKLICDIDGIFEKGQLYVALSRAINPNNLKIVYNYKIPFEN
YFLNILKIDKEVKRFYLEEKFINLEENLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatattaagtagattggaaaattttttaagagataataatatatttttaagtggtggc
gcaggtgtcggtaagtcttttttaactacagagcttataagatcttatagagctcaagga
aaaatcgtcgttgtattgggttctactgcacttagtgtttttaatataggtggggttact
ttacatagtttttttgcttttaaaagatgtcaaaattatgatgagttgtattatgaagat
aggaaacaaagagataaactagaaaaattaaagagaattttaaaacaatgtgatttgttg
gttattgatgaaatctctatggtaagtgcctcattgatggaaatgatttattatagatta
tcaagaagtggttttaatggtaaaattttattagttggagatttttttcaacttccacct
gtggttaaatataaagaaaatcaaactcaaaatactttatttcaaaatactttatatgct
ttttcttcgcaagcttggaatgatcttaaatttattaatttaaaacttagcattgcaaaa
agaactctagataagcaattttatgaatatttgttttttcttagaatgggtgaagtaaat
aaagaaatgttaaatttctttaaaaaaatgctaattagttcaaaaaatttacttgagtat
atggatgaatatactctattgtgtgccacaaataaaaaaactaatcatattaatactgaa
aaattaaatcttttgcaaggtgaagaaagtatatttaaggcaaaagctgaaaaactagat
tgtgctttagatgataaaacttatgagcagtggattaatgggcttaattctttgagtgag
ttaaaattaaaaataggtgttaagattattttttgtgtgaataataaagaagaaaattat
tataatggggagcagggtgttgttttaaattttgtaaaagataaagagcaagaatatgtt
ctgatagaaaaaaataatggtgaaagattgaaattaaaaccatatgaatataccttggaa
gagtatgagcttgatgcaaatgaaaaattagaaattaaaataaaagccaaatttattcaa
tttcctataaaattagcttatgctataacaattcataaatctcaaggtatgagtatagat
aaattaatatgtgacatagatggaatttttgaaaaaggacaattatatgttgctttatca
agagctattaatccaaataatttaaaaattgtatataattataaaattccttttgaaaat
tattttttaaatattttaaagatagataaagaagttaagcggttttatttagaagaaaaa
tttataaatttagaagagaatttggagtaa
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