Campylobacter subantarcticus LMG 24374: CSUB8521_1052
Help
Entry
CSUB8521_1052 CDS
T03571
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csm
Campylobacter subantarcticus LMG 24374
Pathway
csm03030
DNA replication
csm03430
Mismatch repair
csm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSUB8521_1052 (dnaE)
03430 Mismatch repair
CSUB8521_1052 (dnaE)
03440 Homologous recombination
CSUB8521_1052 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csm03032
]
CSUB8521_1052 (dnaE)
03400 DNA repair and recombination proteins [BR:
csm03400
]
CSUB8521_1052 (dnaE)
Enzymes [BR:
csm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSUB8521_1052 (dnaE)
DNA replication proteins [BR:
csm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSUB8521_1052 (dnaE)
DNA repair and recombination proteins [BR:
csm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSUB8521_1052 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
CERK_C
Motif
Other DBs
NCBI-ProteinID:
AJC90888
UniProt:
A0A0A8H9T3
LinkDB
All DBs
Position
complement(1035587..1039180)
Genome browser
AA seq
1197 aa
AA seq
DB search
MSQFTHLHLHTEYSLLDGANKLKELAKTLKAQGATSVAMTDHGNMFGAIDFYKTMRAEGI
KPIIGLEAYLHNHDDLSDKSSRQRFHICLFAKNEIGYKNLMFLSSQSYIHGLYYYPRINK
KLLEAHSDGLICSSACLQGEVNWHLNTKNERNLKFGAKGYEGAKEAALWYKKVFGDDFYL
EIMRHGIDDQKFIDDSIIKLAKELDIKIIATNDTHYTFKERAAAHEVFMCIAMGVKLDDP
GRLRHEVHEFYVKTPEQMSELFADIPEAIENTQEIASKCNLELKLGDPTPPNFKFTREYA
KKYSLNLAQEDQEFSFDNDDIVFEYLCKKGLEERLQFIDESKHQEYKDRLDLEISIIKNM
KFSGYMLIVHDFIVAAKEKDIPVGPGRGSAAGSLVSYCLKITDLDPIPYNLLFERFLNPE
RVSMPDIDVDFCQDRRGEVIDYVIDKYGAEKVAQVITFGKLLAKGVIRDVARVCDMSIPD
ADALAKLVPEELKITLEKAYEQEPKIAEFVNSHPKGRQVWDFAKALEGLNRNAGMHAAGV
VISNEALWNKAPLFRQSKNDERHLVTQYSKEYLEDVDLIKFDFLGLKTLTVIDNAIKLVK
KRYGKDVIWEKIDMNDPKVYKTIQSGNTLGIFQIESGGMQSLNARLKPERFEDLIAVLAL
YRPGPLDSGMVDDFIDIKHGRKAATYAFEDLKPILENTYGVIVYQEQVMQIVQKIGGFSL
GGADNVRRAMGKKKREILDNLKAEYLEGAKKQGYDEKKADDLFELILKFAEYGFNKSHSA
AYALITFQTAYLKTYYPSEFMAALLTSEESNVDKVAKYIEEMKRMNIKLLPPSINKAQRE
FSATKLEDGSEAIIYGLGAIKSVGIPAIENIMAIRKEEGFSDFDDFISSIDPTKINKKTI
ENLAKSGAFDEFGYTRKCLVDNLELISETSRKIAEVKRNSTASLFGEEEIAADIKVGLHG
SKIEFELMEKLGYEKEILGIYVSGHPLDKFASQIESIEYFKSMDFETLKGEGELLVVGKI
EDFKSMMSKSGKRYAKAVILDFYSSFDMIVFEAQVEKVETIFKESKDEAFAFLLRYKNND
NDLSFSLNEIYTLEEAKENELKSFSKRKSFAKKENKEEFTQEPMKFEENIIELDINKLSK
DMVYEIYDLANTRHNPKDANNKKLVLKVLDMGSCLLYHTNFVLSQEAMDVIAQKCKG
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttacacatttgcatttacatactgaatactctttacttgatggggcaaac
aaactcaaagagcttgctaaaacgctaaaagcacaaggtgcaactagtgttgctatgact
gatcatggaaatatgtttggggctattgatttttataaaacaatgagagctgaagggatt
aagcctatcataggacttgaagcgtatttgcataatcatgatgatttaagcgataaaagc
tcaagacagcgttttcatatttgtttatttgctaaaaatgaaattggttataaaaattta
atgtttttaagctcacaaagctatatacatggtttgtattattacccaagaattaataaa
aaacttttagaagctcatagtgatggtttaatttgctcttctgcatgtttgcaaggtgaa
gttaattggcatttaaataccaaaaatgaaagaaatttaaaatttggtgcaaaaggttat
gaaggtgcaaaagaagctgcactttggtataaaaaggtttttggagatgatttttacctt
gagattatgcgtcatggtattgatgatcaaaaatttattgatgattctatcattaaactt
gctaaagagcttgatataaaaatcatcgcaaccaatgatacgcactatacttttaaagaa
agagcagctgcgcatgaagtatttatgtgtatagctatgggggttaagcttgatgatcca
gggcgtttaagacatgaggtgcatgagttttatgtaaaaacaccagagcaaatgagtgag
ctttttgctgatattccagaagctattgaaaatactcaagaaatagctagtaaatgcaat
ttagaattaaaactaggcgatcctactccaccaaattttaaatttacccgtgaatatgca
aaaaaatatagtttaaatctagcgcaagaagatcaagaatttagctttgataatgatgat
atagtttttgagtatctttgcaaaaaaggcttagaagaaagacttcaatttatcgatgag
agtaagcatcaagagtataaagataggcttgatttagaaattagtattattaaaaatatg
aaattttcaggttatatgcttattgttcatgactttatcgttgcggctaaggaaaaagat
ataccagtgggaccagggcgtgggagtgctgcggggagcttggtttcgtattgtttgaaa
attacagatttagatcctataccttataatcttctttttgagagatttttaaatcctgag
cgtgtgtcaatgcctgatattgatgtggatttttgtcaagatagaagaggggaagtgatt
gattatgtgatcgataagtatggagctgaaaaggttgcacaagtcattacctttggtaaa
cttttagcaaaaggggtgattcgtgatgtggctagggtttgtgacatgagtatacctgat
gctgatgctttggcaaaattagttcctgaagagcttaaaatcactttggaaaaagcttat
gagcaagagccaaaaattgctgaatttgtaaattctcatccaaaaggacgtcaagtttgg
gattttgctaaggcattagagggtttaaatagaaatgcaggtatgcatgcggccggagtt
gtgatatctaatgaagctttgtggaataaagctccactttttagacaaagcaaaaatgat
gagcgtcatttggtaacacagtattctaaagaatatcttgaagatgtagatttaatcaaa
tttgactttttaggtttaaaaactcttacggtaattgataatgcgattaagctagttaaa
aagcgttatggtaaagatgtgatttgggaaaagatcgatatgaatgatcctaaggtttat
aaaaccatacaaagtggtaataccttgggtattttccaaatagaatcaggtggtatgcaa
agtttgaatgctagattaaagcctgagagatttgaggatttaatcgcggttttagcttta
tatagaccagggccacttgatagtggaatggtggatgattttatcgatattaaacatggt
agaaaggctgcaacttatgcctttgaagacttaaaacctatacttgaaaatacttatggg
gttatagtttatcaagagcaagttatgcaaatagtgcaaaaaattggtggtttttctttg
ggtggtgctgataatgtgcgccgtgctatgggtaagaaaaaaagagaaattttggataat
cttaaagcagagtatctagaaggagctaaaaaacaaggctatgatgagaaaaaggctgat
gatttgtttgagcttattttgaaatttgctgagtatggttttaataaatctcactcagct
gcctatgcacttataacctttcaaacagcgtatttaaagacttattacccaagtgagttt
atggctgcgcttttaacaagtgaagaaagcaatgtagataaggtcgcaaaatacattgaa
gagatgaaaagaatgaacatcaaacttttgccaccaagcattaacaaagcccaaagagaa
tttagtgcaactaagcttgaagatggttctgaagctattatctatgggcttggagcgatt
aaaagtgtggggattcctgcgatagaaaatatcatggctattcgcaaggaagagggcttt
agtgattttgatgattttattagttcgattgatccaactaagatcaataaaaaaaccata
gaaaatttagctaaatcaggtgcttttgatgagtttggctatactagaaaatgtttggtg
gataatcttgagcttatttcagaaacaagtaggaaaatcgccgaggttaaaagaaactct
actgcttcactttttggagaagaagaaatagccgcagatatcaaagtggggcttcatggt
agcaagatagaatttgaactaatggaaaaactaggatatgaaaaagaaattttaggaatt
tatgtatcaggtcatcctttggataaatttgcaagtcaaatagaaagcatagagtatttt
aaaagtatggattttgaaacactcaaaggcgagggcgagcttttggtggtagggaagatt
gaggattttaaatcgatgatgagtaaaagtggtaaaagatatgctaaggctgtgatttta
gacttttactcttcttttgatatgatagtttttgaagctcaggtggaaaaagtagaaacg
attttcaaagaaagtaaagatgaggcttttgcttttttactaagatataaaaacaatgac
aatgatttaagctttagtctaaatgaaatttatactttagaagaagcaaaagaaaatgag
ctaaaatcttttagtaaaagaaaaagctttgcaaaaaaagagaataaagaagaattcacg
caagagcctatgaaatttgaagaaaatatcatagagcttgatattaacaaacttagcaaa
gatatggtgtatgaaatttatgatctagctaatacaagacataacccaaaagatgccaat
aacaaaaagcttgtgctaaaagtgcttgatatgggtagctgcttgctttatcacacaaat
tttgtcctttcgcaagaagctatggatgtgatagctcaaaaatgtaaaggttga
DBGET
integrated database retrieval system
