Campylobacter subantarcticus LMG 24374: CSUB8521_1364
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Entry
CSUB8521_1364 CDS
T03571
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
csm
Campylobacter subantarcticus LMG 24374
Pathway
csm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSUB8521_1364 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csm03400
]
CSUB8521_1364 (uvrB)
DNA repair and recombination proteins [BR:
csm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSUB8521_1364 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSUB8521_1364 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
Microtub_bd
SWI2_SNF2
HAAS
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJC91193
UniProt:
A0A0A8HAM0
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All DBs
Position
1350636..1352609
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AA seq
657 aa
AA seq
DB search
MFELTSDFSPSPDQKQAIDGLVKSIKAGNKYQTLLGVTGSGKTFTMANIIKNLNMPTLIM
SHNKSLCAQLYSEFKGFFANNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSASASLLSYDDVICIASVSANYGLGNPSEYVGMVLILELNMQISQKELLKKLVDMGYKR
NDNFFDRADFRVNGDIVDIYPAYYEDEAIRLEFFGDELEAMYHYNVLENKKGKDLKKFIL
YPTSQFSVGETRLKEAIKGIKAELNKCLAYFENENKLVEAQRLKQRVEFDLEMLQSTGMC
KGVENYALHLTGLKSGDTPYTLFDYFAIKNQDFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFINKNCKFLFVSATPAPLELELSKENIFYQIMRPTGLLD
PKIEIKDSENQVEILYDEAKKVIERNERVLITVLTKKMAEELSKYYLELGLKVKYMHSEI
DAIERNEIIRGLRSGAFDILIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTALIQTMG
RAARNVNGKVLLFAKKITKSMQEAIDTTNERRTLQEAYNKKHNITPTSVKRNIEESLKHE
LEQGEIYRKGKELEKMPAKERAKIVKELRKQMLEAAKNLEFEKAAILRDEINKLRTL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacttactagcgactttagtccaagtcctgatcaaaaacaagccattgatggt
ttggtaaaaagcattaaagcaggcaataaataccaaaccttgctaggtgttacaggtagt
ggaaaaactttcactatggcaaatatcattaaaaacttaaacatgcctactcttatcatg
agtcacaataaaagcttatgcgcgcaactttatagtgaatttaaaggcttttttgcaaat
aatcatgtggagtattttataagctattatgattattatcaacccgaggcttatattcca
agaaccgatgtttttatagaaaaagacagctctactaatgaagacttagaaagattaaga
ctaagcgcaagtgcttcgcttttaagttatgatgatgttatttgcatagctagtgtttca
gcaaattatggtttgggaaatccaagtgagtatgtgggtatggttttgattttagagctt
aatatgcaaatttcacaaaaagaacttttaaaaaaacttgtagatatgggttataaacgc
aatgataacttctttgatagagctgattttagagtaaatggagatatagtagatatatat
ccagcttattatgaggatgaagctattagacttgaattttttggcgatgaacttgaggcg
atgtatcattataatgttttagaaaataaaaaaggtaaagacttaaaaaaatttatactt
tatccaactagtcaatttagcgtaggtgaaactagacttaaagaggctataaaaggtata
aaagctgaattaaataaatgccttgcttattttgaaaatgaaaacaaactcgtagaagca
caaagactaaaacaaagggtagaatttgaccttgaaatgcttcaaagcaccggcatgtgt
aaaggggtagaaaattatgccttgcatttaacagggcttaagagcggcgatacaccttat
acgctttttgattattttgccattaaaaatcaagattttttagtcattgtagatgaatct
catgtatctttaccacaatttcgcggaatgtttgcaggggatagaagcagaaagcaaact
ttggttgattatggttttcgcttgccaagtgccttagataatagacctttgatgtttgat
gaatttattaataaaaattgtaaatttttatttgtttcagctacacctgcacctttagaa
ctagaattaagcaaagaaaatattttttatcaaatcatgcgtccaacagggcttttagat
cctaaaatagaaatcaaagatagtgaaaatcaagtagaaattttatatgatgaagctaaa
aaagttatagagcgtaatgaaagagttttaataaccgttttaactaaaaaaatggctgaa
gagcttagtaaatactacttagaacttggcttaaaagtaaaatacatgcactcagaaatt
gatgcaattgagcgcaatgaaatcatccgtggcttaagaagtggcgcttttgatatttta
atcgggattaatcttttaagagaaggacttgatttacctgaagtttcccttatagcgatt
atggatgcagacaaggaaggctttttaagaagcaccactgcactcattcaaactatggga
cgcgcggctagaaatgtcaatggaaaagtattgctttttgctaaaaaaatcacaaaatct
atgcaagaagctatcgataccaccaatgaaagaagaaccctacaagaagcttataataaa
aagcacaacatcacaccaacctcagtaaaaagaaacatagaagaaagtttaaaacatgag
cttgaacaaggagaaatttatcgtaaaggcaaagaacttgaaaaaatgcctgcgaaagaa
cgcgctaaaatagtaaaagaattaagaaaacaaatgctagaagcagctaaaaatcttgag
tttgagaaagcggcaatacttagagatgaaattaataaattaagaactttataa
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