Cyanobacterium stanieri: Cyast_0512
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Entry
Cyast_0512 CDS
T02377
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csn
Cyanobacterium stanieri
Pathway
csn03030
DNA replication
csn03430
Mismatch repair
csn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cyast_0512
03430 Mismatch repair
Cyast_0512
03440 Homologous recombination
Cyast_0512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csn03032
]
Cyast_0512
03400 DNA repair and recombination proteins [BR:
csn03400
]
Cyast_0512
Enzymes [BR:
csn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cyast_0512
DNA replication proteins [BR:
csn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cyast_0512
DNA repair and recombination proteins [BR:
csn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cyast_0512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
tRNA_anti_2
Intein_splicing
DUF3502
Motif
Other DBs
NCBI-ProteinID:
AFZ46491
UniProt:
K9YHP8
LinkDB
All DBs
Position
570611..572011
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AA seq
466 aa
AA seq
DB search
MVKIVKRRSHGIQKVYDIGVAKDHNFLLHNGLVASNCFNKSHSTAYAYVTYQTAYLKANY
PVEYMSALMTASSDTQEKVEKYRENCLKMGIEVKPPNINKSQKDFTPDGDTIIFGLSAIK
NLGEGAIDNILHAREEAGGEFKDMSDFMGRINLKTVNKRALETLVYAGAFDPIHNNRKQL
LEGLELLISWSQKRHQEKESGQLNMLDLLGGSAESSNTNQVVYANAPQLPKIEDFSAQEK
LKSEKEYLGFYVSEHPLKPFVDSAKILAPINIGDLPAQKARKKICVVAMLTSIKPHIDKN
GNTMAFLTAEDISGQVDAIVFASTYDEVKNQLREDVPVIIWGKADKNKRDDKPQIIIDYI
EIIDQVKMVLVNLNYHQAEDPKTQGKLKSILQEQSGEKNKAKIPVFAVINELQERIFIRL
GHNYWVQNAENTVNALRNAGFNAHSQCLQTSSSPSEIIEKETIPNT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatagttaaaaggcgatcgcacggtatccaaaaagtatatgatataggggta
gcaaaagaccataattttttacttcataatggtttagtcgcttccaattgttttaataaa
tcccactctaccgcctacgcctatgtcacttatcaaacagcatatttaaaggcaaattat
cctgtagaatatatgtcggctttaatgacggcaagtagtgatactcaggaaaaggtagaa
aaatatcgagaaaattgcctcaaaatggggatagaggtaaaacctcctaatattaataaa
tcccaaaaagattttactcccgatggggatactataatttttggtctatctgctattaaa
aatttaggtgaaggggcgatcgataatattcttcatgcgagggaagaagcagggggagaa
tttaaagatatgagcgattttatggggcgtattaacttaaaaacggttaataaaagagcc
ttagaaacccttgtttatgcgggtgcttttgatcctattcataacaatagaaaacaactc
ttagaaggattagaattactcatcagttggtcacaaaaaagacatcaagaaaaagaaagt
ggtcagcttaatatgcttgatttattgggaggttctgccgaatcaagtaatactaatcaa
gtggtttatgccaatgctccccaattacctaaaatagaagatttttcggcccaagaaaaa
ctaaaatctgaaaaagaatatttaggtttttatgtttctgaacatcccttaaagcccttc
gttgattctgccaaaatactcgcccctatcaatattggtgatttaccggctcaaaaagca
agaaaaaaaatctgtgtggtagccatgcttaccagcattaagcctcacatcgataaaaat
ggtaataccatggcattcctcaccgccgaagatatttctggacaagtagatgcgatcgta
tttgctagtacctacgatgaagtgaaaaatcaactcagggaagatgtacctgtgattatc
tggggtaaagcagataaaaataaaagagatgataaaccgcaaattatcatcgactatatc
gaaataattgatcaagtgaaaatggtgttagtaaacttaaactaccatcaagccgaagat
cccaaaactcagggaaaattgaaaagtatattacaggaacaatcaggagaaaaaaataaa
gccaaaattcctgtttttgccgtcatcaatgaattgcaagaaagaatttttattcgtttg
ggacacaactactgggtacaaaatgctgaaaatacagtcaatgccttacgcaatgcaggg
tttaatgcccatagtcaatgtttgcaaacttcttcttccccttcagaaatcattgaaaaa
gaaaccatccccaacacctag
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