Cyanobacterium stanieri: Cyast_0828
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Entry
Cyast_0828 CDS
T02377
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
csn
Cyanobacterium stanieri
Pathway
csn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cyast_0828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csn03400
]
Cyast_0828
Enzymes [BR:
csn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cyast_0828
DNA repair and recombination proteins [BR:
csn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cyast_0828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
DUF2321
CTD
MarR_2
zf-CHY
Zn_ribbon_NOB1
AAA_16
T2SSE
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AFZ46800
UniProt:
K9YK81
LinkDB
All DBs
Position
924866..927490
Genome browser
AA seq
874 aa
AA seq
DB search
MYPQSSSILTVAEPRSEYGSKNYEWVEVLVDCPYAEGLYTYRIGDEVEVKAGDILSVPFG
NSVVGAIALRLVSQPPEGLEIEQIKTVEDVITSGFFPPRYWELLTRISEYYLTDLIYVIK
CALPPKLLGKSQKRVRLLFDNIPLGAENFCPRIAWRVLELLQNSKNGDYTFSYINQKVKG
ARRGINDLVKRNWAQTYLQPPAKAKPKYQKVVTFISENSSVKITQKQRDVLATLKINGGE
LSQQDLMQKCELNSNSVINSLAKKGCVVVQERESLRLLQNSAPAKDQPKILTKEQQCALD
TINSLQGYSVALLHGVTGSGKTEVYLRAIAPILEQKKSALVLVPEIGLTPQLTDRFRARF
GSQVCVYHSGLSDGERYDTWRQMLTGEPQVVIGTRSAVFAPLPNLGMIILDEEHDTSFKQ
SQPVPPYHAKTVAQWRSELVDCPLILGSATPSLESWQLTTGGQTPPALGAGRQTPPALGA
GRQTPPALGAGGQTPPELGAGGQTPESEQKNHYLSLPNRVYNRPLPPVEIVDMRHELRKG
NRSIFSHSLANALGNLKEEGKQAILFISRRGHSTFVSCRSCGYVMECPHCDVSLSYHYPK
EGATQLLRCHYCNHTQIHPKHCPECGSPYLKFFGTGTQKVLLELQKAFPELKVLRFDSDT
TSTKNAHRRILEDFEAGKADVLIGTQMLTKGIDLAQVTLVGVVSADGLLFHSDYRASERA
FQTLTQVAGRAGRGDDPGQVIIQTYSPEHPVIGAVRTHNYSAFIATELEQREMLDYPPYG
SLILLKCTGADGNKVREAVEAIADVCEQILPDDVEILGPAPANVMRVARRYRWQILLKSL
EPFSPQLKQELLTLKQYCPSTVSFSFDVDPVRIE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctcaatcttcatcgatacttactgtagctgaacctcgtagcgaatatggttca
aaaaattatgagtgggtggaggtgttggtggattgtccttatgcggaaggattatatact
tatcgtataggggatgaggtggaggtgaaggcaggggatatactcagtgtgccttttggt
aattcagtagtaggtgcgatcgcccttagactggtatcccaacccccagagggactagaa
attgagcagataaaaacagtggaggatgtgatcacatcgggcttttttcctcctcgttat
tgggaattattaactaggatttcggaatattatttaacagatttaatctatgttattaaa
tgtgcattaccaccaaaattattaggtaaatcgcaaaaaagagttaggcttttatttgac
aatattcccctaggggcagaaaacttttgtcctcgtattgcgtggcgagtattagaacta
ttacaaaatagtaaaaacggtgattatacctttagttatatcaatcaaaaagtaaaaggg
gcaagaagaggaatcaatgatttagtaaaaagaaactgggcgcaaacttatctacaaccc
cctgccaaagccaaacctaaatatcaaaaagtagtcacttttattagtgaaaattcttcg
gttaaaataactcaaaaacaaagggatgttttagctaccctcaagataaatggcggggaa
ttgtctcagcaggatttgatgcaaaaatgtgagttaaatagtaattctgttattaatagt
ttggcgaaaaaaggttgtgtggtagtccaagaaagggaaagtttacgactgttacaaaat
tctgcccctgcaaaagatcaaccaaaaatattgacaaaagagcaacaatgtgcattagat
acaattaatagtttacaagggtatagtgtcgccctgttgcacggcgtgacaggatctggg
aaaactgaagtatatctaagggcgatcgcccctattttggaacaaaaaaaatcagccctt
gtgctagtacccgaaatcggcttaaccccccaactcaccgacagatttagagccagattt
ggctcccaagtgtgcgtttaccatagtggattaagtgacggggaaaggtacgacacatgg
cggcaaatgctcacaggagaaccccaagtagtcatcggcacccgtagcgccgtatttgca
cccctgcccaacctcggcatgatcattcttgatgaagaacacgacaccagctttaaacaa
agtcaacccgttcccccctaccatgccaaaaccgtcgcccagtggcgctcagaattggta
gattgccccctcattttaggttcagctaccccctccctcgaatcatggcaactcaccaca
ggggggcaaacacccccagcattgggggcagggaggcaaacacccccagcattgggggca
gggaggcaaacacccccagcattgggggcaggggggcaaacacccccagaattgggggca
ggggggcaaaccccagaatccgagcaaaaaaaccactacctatccttacccaaccgagtc
tataatcgccccttaccccccgtagaaattgtcgatatgcgccatgagttgcgcaagggc
aaccgtagcatctttagtcattccctcgccaacgccctcggcaacctgaaggaggaagga
aaacaggcaattctttttatttcccgtcggggacatagcacttttgtatcctgtcgtagt
tgtggttatgtgatggaatgcccccactgtgatgtttctttgtcctaccattatcccaag
gaaggggctacccaactgttacgctgtcactattgcaaccatacccaaattcatcctaaa
cattgccccgaatgtggttcgccctatctcaagttttttggtacgggtacccaaaaggta
ttattggagttgcaaaaagcctttcctgagttgaaagtattacggtttgacagtgacacc
accagcacaaaaaacgcccatcgccgtattttagaggattttgaggcaggtaaggcggat
gtgttgattggtactcaaatgttaaccaaaggcattgatttggctcaagtaacccttgtg
ggggtggtatctgcggatgggttgttattccattccgattatcgagctagtgagagggct
tttcaaaccttaacccaagtggcaggaagggcagggcgaggggatgaccccgggcaggtg
ataatacaaacctactcccccgaacatcctgttatcggggcagtgcgcactcacaattat
tcggcattcatcgccacggaattggagcaacgggagatgctcgattatcctccctatggt
agtttaattttgctcaagtgtacaggggcagatggaaacaaggtcagggaagcggtagag
gcgatcgccgatgtttgtgaacaaatactacccgatgatgtagaaattttgggccctgcc
cctgccaatgtgatgagggtagctaggcgttaccgatggcaaattttgctcaaatccctt
gagcctttttcccctcaattaaagcaggaattattaaccctaaaacaatattgtcctagt
acggtatcttttagttttgatgttgaccccgttaggattgagtag
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