Cyanobacterium stanieri: Cyast_1155
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Entry
Cyast_1155 CDS
T02377
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
csn
Cyanobacterium stanieri
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csn03016
]
Cyast_1155
Enzymes [BR:
csn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Cyast_1155
Transfer RNA biogenesis [BR:
csn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Cyast_1155
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DUF7017
NADase_NGA
Motif
Other DBs
NCBI-ProteinID:
AFZ47122
UniProt:
K9YKY4
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All DBs
Position
1278247..1278876
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AA seq
209 aa
AA seq
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MSLDNFLVCEEDLPLNIFEQYYQSDVLAIDTETMGLVPQRDRLCLVQLCDRQGFVTAIRI
KKNQTQAPNLVKLLEAQHITKIFHFARFDVAQFLYTFGAKTEPIFCTKVASKMARTYSSS
HGLKTIVQELEGIELDKKAQSSDWGNVASLSPAQLSYAANDVRYLIPMREKLIAMLEREE
RWDLAKRCIDTISLFVELDLNYYKDIFEH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagataattttttggtttgcgaggaagatttacctctcaatatttttgagcaa
tactatcaaagcgatgttctcgccattgataccgaaactatgggtttagttcctcagcgc
gatcgcctctgcttggttcaactgtgcgatcgccaaggttttgtgaccgccattcgcatc
aaaaaaaatcaaacccaagctcctaatctcgttaaactattagaagcgcaacatatcacc
aaaattttccactttgcccgttttgacgtagcccaatttttatacacctttggagcaaaa
acagagccgatattctgtaccaaggtagcgagtaaaatggcaaggacttactcctctagc
catggcttaaaaaccatcgtccaagaattagaaggtatagaactagataagaaggctcaa
agctcagactggggaaatgttgccagtctttctcctgcacagttaagctatgccgccaat
gatgtgcgttatcttattcccatgagggaaaaattaatcgccatgctagaaagggaagag
cgttgggatttggcgaaaagatgtattgacactatttccctattcgtagaactagattta
aactattacaaagatatttttgaacattaa
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