Cyanobacterium stanieri: Cyast_1251
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Entry
Cyast_1251 CDS
T02377
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
csn
Cyanobacterium stanieri
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cyast_1251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csn03021
]
Cyast_1251
Transcription machinery [BR:
csn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cyast_1251
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
DUF7302
UPF0154
Motif
Other DBs
NCBI-ProteinID:
AFZ47216
UniProt:
K9YJV2
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Position
1375868..1377043
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AA seq
391 aa
AA seq
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MTQAQEIFATITPTNDIDELLELGSNSSKSKTSVNVDTELTEIITEADSIGVADASNKKA
RKLPATRRRTQTKKKPFTEDSIRVYLQEIGRIRLLRAEEEIELARQIADLLDLEYIRATQ
IEHLGRIPTDEEWAIACDIPNMRQFNRRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLS
FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI
SRIKKTTKMLSQKMGRKPTEEEIAEDMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG
DFIEADGETPEDEVSKNLLREDLENVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFN
VTRERIRQIEAKALRKLRHPNRNSILKEYIR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggcacaagaaattttcgcaactatcacccccaccaatgacatcgatgagctt
ttagaattaggatcgaactctagtaaaagtaagacttcggttaatgtggatacggagtta
acggaaatcatcaccgaagcagactctattggggttgccgatgctagtaataagaaagcc
cgaaaacttcctgcgactcgtcgtcgaactcaaactaagaaaaagccttttactgaagat
tctattcgtgtttaccttcaagaaattggacgcatcagacttttaagggcagaggaagag
attgagttggcccgtcagattgcagacttgttggatttagaatatatccgtgctactcaa
attgagcatttaggacgtattcccaccgatgaagaatgggcgattgcctgtgacatccct
aatatgcgacagtttaaccgtcgtttgcatattggcagaagggcaaaagataagatggtt
cagtcaaatctgcgtttagtggtatccatcgccaaaaagtatatgaaccgagggttatct
tttcaggatttgattcaagagggttcgttgggtttgattcgcgccgctgaaaagtttgac
cacgaaaagggttacaaattctccacctacgccacatggtggattcgtcaagccattacc
cgtgcgatcgcagatcaatcccgtaccattcgtctccccgtgcatctctacgaaaccatt
tcacggatcaagaaaactactaaaatgctttctcaaaaaatgggcagaaaacccaccgag
gaagaaatcgccgaagatatggagatgaccatcgaaaaattaagattcatcgccaaatct
gcacaactacccatttcccttgaaacccccatcggtaaggaagaagattctcgcctcggc
gactttatcgaagctgatggagaaactcccgaagatgaagtatccaaaaacctcttgcgc
gaagatcttgaaaacgtcctcgattcccttagccctcgcgaaagagacgttctcagacta
cgttatggtttggatgatggacgcatgaaaaccctagaagaaatcgggcaaatatttaat
gttacccgtgagcgtatccgtcaaatcgaagctaaagcattacgcaagttgcgtcatcct
aaccgtaatagtatcctaaaagaatatattcgttag
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