Cyanobacterium stanieri: Cyast_1787
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Entry
Cyast_1787 CDS
T02377
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csn
Cyanobacterium stanieri
Pathway
csn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cyast_1787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csn03019
]
Cyast_1787
03110 Chaperones and folding catalysts [BR:
csn03110
]
Cyast_1787
03029 Mitochondrial biogenesis [BR:
csn03029
]
Cyast_1787
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csn04147
]
Cyast_1787
Enzymes [BR:
csn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Cyast_1787
Messenger RNA biogenesis [BR:
csn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Cyast_1787
Chaperones and folding catalysts [BR:
csn03110
]
Heat shock proteins
HSP60 / Chaperonin
Cyast_1787
Mitochondrial biogenesis [BR:
csn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Cyast_1787
Exosome [BR:
csn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Cyast_1787
Exosomal proteins of other body fluids (saliva and urine)
Cyast_1787
Exosomal proteins of breast cancer cells
Cyast_1787
Exosomal proteins of colorectal cancer cells
Cyast_1787
Exosomal proteins of bladder cancer cells
Cyast_1787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Cob_adeno_trans
Motif
Other DBs
NCBI-ProteinID:
AFZ47743
UniProt:
K9YNT6
LinkDB
All DBs
Position
complement(1988068..1989690)
Genome browser
AA seq
540 aa
AA seq
DB search
MSKSIIYNEDARRALERGIDLLAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIE
LEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAHAIVKEGLRNVAAGANPIALKRGID
KATEHLVEKIAAHARKIEDSKAIAQVGAISAGNDTEVGEMIAQAMDKVGKEGVISLEEGK
SMETELEITEGMRFEKGYISPYFVTDAERMEAVFEEPFILITDKKITLVQDLVPVLEQVA
RQGKPLIIIAEDIEKEALATLVVNRIRGVLNVAAVKAPGFGDRRKQMLEDIAILTGGQMI
SEDAGLKLDTTTVDQLGTARRMTITKDTTTIVAEGNDKEVKSRCDQIRRQIEESDSSYDK
EKLQERLAKLSGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APGLEEWAKGNLTAEQLTGALIVARALTAPLKRIAENAGQNGAVVAERVKEKDFNTGYDA
ANDQYVDMFDAGIVDPAKVTRSGIQNAASIAGMVLTTECIIVDKPEKDKAAAPAGGDFDY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtctatcatttataacgaagatgcccgtcgcgccctagagcgtggtattgat
ttgttagccgaagccgttgctgttaccttgggccctaaaggtcgtaacgtagtattggaa
aaaaaattcggtgctccccaaatcgttaatgacggtgtaaccatcgccaaagaaatcgaa
ttagaagatcatatcgaaaacactggggttgctttgattcgtcaagccgcttccaaaacc
aatgatgtcgcaggagacggtaccaccaccgctactgtattggctcatgccatcgttaaa
gaaggtttacgcaacgttgccgcaggtgctaaccccatcgccctcaaacgtggtattgac
aaagctactgagcatttagtagaaaaaatcgctgcccatgccagaaaaatcgaagatagc
aaagccatcgctcaagtgggtgctatctctgcaggtaacgacaccgaagtaggtgaaatg
attgcccaagccatggataaagtaggtaaagaaggagttatctccctcgaagaaggtaaa
tccatggaaaccgaactcgaaatcaccgaaggtatgcgtttcgagaaaggttacatctcc
ccttacttcgtaaccgatgctgaacgtatggaggcagtatttgaagagcctttcatcctc
atcaccgacaaaaaaattaccttagtccaagacttagttcccgttttagaacaagttgcc
cgtcaaggtaaacccttaatcatcatcgctgaggacatcgaaaaagaagccctcgccacc
ttagtagtaaaccgcatccgtggtgtattaaacgttgcagcggttaaagcccccggtttt
ggcgatcgccgtaaacaaatgctcgaagacattgccatcctcactggtggacaaatgatt
agcgaagatgcaggattaaaattagatactaccaccgtagatcaactcggtactgcccgt
cgcatgaccatcaccaaagacaccaccaccatcgtcgccgaaggtaacgacaaagaagtt
aagagccgttgtgaccaaattcgtcgtcaaattgaggaatccgattcttcctacgacaaa
gaaaaattacaagagcgcctcgcaaaattaagcggtggtgtagctgtaatcaaagtaggt
gcggctaccgaaaccgaaatgaaagatcgtaagctccgcttagaagatgccatcaatgct
accaaagcggcagtagaagaaggtattgtccccggtggtggaactaccctcgctcacctc
gcccccggtttagaagaatgggcaaaaggcaacttaaccgccgaacagctaactggtgct
ttaatcgttgcccgtgctttaactgcacccttaaaacgtattgcagaaaatgcaggtcaa
aatggtgctgtggtagctgaaagagttaaagaaaaagactttaacactggttacgatgcc
gccaacgatcaatatgttgatatgtttgatgcaggtatcgttgatcctgccaaagtaact
cgctctggtattcaaaacgccgcttccatcgctggaatggtactaactaccgagtgtatc
atcgttgacaaacccgaaaaggataaagccgcagcccctgccggtggagatttcgactac
taa
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