Cyanobacterium stanieri: Cyast_2021
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Entry
Cyast_2021 CDS
T02377
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csn
Cyanobacterium stanieri
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csn03400
]
Cyast_2021
DNA repair and recombination proteins [BR:
csn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cyast_2021
Archaeal homologous recombinant proteins
Cyast_2021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
Rad50_zn_hook
AAA_27
AAA_29
AAA_21
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFZ47972
UniProt:
K9YNE3
LinkDB
All DBs
Position
complement(2241968..2244994)
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPKKLILQNFLSYRQASLNFDGLHTACICGANGAGKSSLLEAITWAIWGKTRAKASEDV
IHLGEKNTRVDFEFSYGEQIYRIIRTKQRKGGSTLDFQVLHNLQFNSISGKGVTETQERI
NDCLKVDYDTFSNSAYLQQGQADKFMSYGAAQRKDILVKLLKLDDYDKIADVAKESAKKY
GEEKTRLQGQWELLEGKLEEKESYHLALQNLSQDLTYHQGEYHQVEESLKQVQLLNTERD
TLEKELSWQNNQLMEMKNKLRQCVQEKEILLQEIKDLSSILSQEREIIDNYHLLQSCLDE
DKVLTHSFGLYKQFVSEKNQLEETLRQEISSLEQSIRETNFKLEELAKSEQDLLKVISER
EKIIDDVEKCRYYRDQLAHLDSVRNEFNLLQQEESRLIKELEKEEARLSSRVEQLQKQEL
PLEEKVRAIPTIRQDYFQTKEALKVIYNQKNYLTRVEEKKADQLLAKQRLVDYKSSIAQR
VEEINQKLATLQVDNNALCPVCESPLDEVHLNHVIGNGLEELRGLENSAWQYESDIIQCD
RTLGELTQEIQSLKNQLSEEDILQKKYIYLENTLNNMDDIYDQLDEIITEKEELMKLIDE
QKYLPNLKIELSQVRNKIKALGYSPESYSLVRENDHKYRWAETNYQRLQEAETKLTKLAE
NKVNLQQKLEHFNQQLTSLRDNSELQQKITQIDKNITEINYSDERHGEVRKTIQDLQNYQ
FQYLKLEDAKKQLPILNNKLTQYEEKIGEYGAEIAEKETKVKSLQEKLSGLFDYSNELNK
LQLEANEKRNKINQLLSEKGGIEKSLTDLSKDEKKIQSITKQIREIEKNYRIYTELQKAF
GKNGIQALMIENLLPQLEAEANQILSRLTNNQLHIQFVTQKEKVTKSKKSDSNFKDTLDI
IISDAQGTRSYETYSGGESFRINFSIRLALSRILAQRSGTALQLLIIDEGFGTQDDAGCD
RLIAALNAIADDFACILTVTHMPQFKEAFQSRIEVYKTNEGSKIRLSV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattcccaaaaaattgatattacaaaactttcttagctatcgtcaggcgagtttaaat
tttgatggcttacacacggcttgtatctgtggcgctaatggtgctggaaaatcatctttg
ctagaagctatcacctgggcaatttggggtaaaacaagggcaaaagctagtgaggatgtg
attcatctgggggaaaaaaatacaagggttgattttgagtttagttatggcgaacaaatt
tatcgcattattcgtactaagcaaagaaagggaggttcaactttagattttcaggtactt
cataatcttcagttcaattctatttcaggcaagggagtaacggaaactcaggaaagaatt
aatgattgtttgaaggttgattacgatactttttccaattctgcttatttacaacaaggg
caggcagataaatttatgagttatggggctgcccaacgtaaggatattttagtgaaactg
cttaagttggatgactatgacaaaattgctgatgtggcgaaagagtcggcaaaaaaatat
ggggaggaaaaaactcggttacaggggcaatgggagttgttggagggtaaactggaggag
aaggaaagttatcatttagcactgcaaaatttaagtcaggatttgacttatcatcaggga
gaatatcatcaagttgaagaaagtttaaagcaagttcaacttttgaatacggaaagggat
actttagaaaaggagttatcctggcaaaataatcagttgatggagatgaaaaataaactt
cgtcaatgtgttcaggaaaaggaaattttgcttcaagagattaaggatttaagttctatt
ttaagtcaagaaagggagattattgataattatcatttgttgcaaagttgtttggatgag
gataaggttttaacccatagttttggtttgtataaacagtttgtttctgaaaaaaaccag
ttagaagaaaccctacgacaagaaatttctagtttagaacaaagtattcgagaaaccaat
tttaagttggaagaattggcaaaaagtgagcaggatttgttaaaggtaattagtgagagg
gaaaaaattattgatgatgtggaaaagtgtcgatattatcgagatcaattagctcatttg
gattctgtgagaaatgagtttaatcttttgcaacaggaagagtctcgattaattaaggag
ttggaaaaggaggaggcgaggttatcttctcgagtggaacaattgcaaaaacaagagtta
cctttggaggaaaaggtgagggctattcctactattcgtcaggattattttcaaactaaa
gaagccttaaaggttatctataatcaaaaaaattatcttactcgagtggaggaaaaaaag
gctgatcaattattagcaaaacaaagattggttgattataaatctagtattgctcaacgg
gtggaggaaattaatcaaaagttggcaactttacaggttgataataatgctctttgtcct
gtgtgtgagtctcctttggatgaggttcatcttaatcatgttattggtaatggtttggag
gagttgaggggattagaaaattctgcttggcagtatgagtctgatattatacagtgcgat
cgcactttaggagagttaacccaagaaattcagagtttaaaaaatcaattaagtgaggag
gatattttacaaaaaaaatatatctatttggaaaatactcttaataatatggatgatatt
tatgatcaattagatgaaattatcactgaaaaagaggagttaatgaagttaattgatgaa
cagaaatatttacctaatctaaaaatagaattaagtcaagttagaaataaaattaaagcc
cttggatatagtccagaaagttatagtttagtgagggaaaatgatcataaatatcgttgg
gcagaaactaattatcaacgattgcaagaagcggaaacaaaattaaccaaattggcagaa
aataaagttaatttacaacaaaaattagagcattttaatcaacaattaacaagtcttagg
gataattcagaattgcaacagaaaattactcagatagataaaaatatcactgagattaat
tatagtgatgagcgtcatggagaggtgaggaaaacaattcaagatttacaaaattaccaa
tttcaatatcttaaattagaagatgctaaaaaacagttgcctatattgaacaataagtta
actcaatatgaggaaaaaattggggagtatggggcagaaatagcagaaaaagaaacgaag
gttaaaagtttacaagaaaagttatctggtttatttgattatagtaatgagttaaataaa
ttgcaattagaagctaatgaaaaaaggaataaaattaatcaattattaagtgaaaaagga
ggaatagaaaagtctttaacagatttgagtaaagacgaaaaaaaaatccaatccattaca
aaacaaattagagaaatagaaaaaaactatcgtatttatacggaattgcagaaggctttt
gggaaaaatggtattcaagccttaatgatagaaaaccttttacctcagctagaggcagaa
gcaaatcaaatcctcagtcgtctgactaataatcaattacatatccaatttgtgactcaa
aaagaaaaagtaactaagtcgaaaaaatcggattccaattttaaagatacccttgatatt
atcatctccgatgctcaaggaactcgatcttatgaaacctattcgggaggagaaagtttc
cgcattaatttctctattcgtcttgccctttctcgtattttggctcaaaggtcgggaact
gctttacaattactgatcatagatgagggttttggtactcaggatgatgcagggtgcgat
cgcctcatagccgccttaaatgccattgctgatgattttgcctgtattctcactgttacc
cacatgccacagtttaaagaggctttccaatctcgcattgaggtatataaaaccaatgaa
ggatcgaaaattcgtctttctgtctaa
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