Cyanobacterium stanieri: Cyast_2490
Help
Entry
Cyast_2490 CDS
T02377
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csn
Cyanobacterium stanieri
Pathway
csn03420
Nucleotide excision repair
csn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cyast_2490
03430 Mismatch repair
Cyast_2490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csn03400
]
Cyast_2490
Enzymes [BR:
csn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cyast_2490
DNA repair and recombination proteins [BR:
csn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cyast_2490
MMR (mismatch excision repair)
Other MMR factors
Cyast_2490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Helicase_RecD
ArdA
DEAD
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFZ48433
UniProt:
K9YQM8
LinkDB
All DBs
Position
complement(2731546..2733840)
Genome browser
AA seq
764 aa
AA seq
DB search
MEQPLENLIKQLRPGQDILGRWQQGEMAVSAVPGAGKSHSLAVAAAATIAREKLNLRRQL
IIVTYTRSATASIKQKVEKNLAYLGLPPIGFSVQTIHGLALNIASQYPELSQLNLNQSNL
VSPNSNHRLIKHTVNQWIDENPHLFEVLVEGRQGFGGEESEKMRRESIIRSELLPNLART
VIKEAKCSGKTPQSLAHYIDYTRDDYQIMAIASGLYKNYQNLMIENNFIDYDDMILGALK
VLQNNEARKIWQQQIHAVFEDEAQDSSPLQVELLEILAKDDEKPHLEANLVRVGDPNQAI
NSTFTPADPVYFNWFCNLCSQKNCLATIAQAGRSTQVIIDTANQTLDFVNHQALKKSKNN
DKIHLPFRQQYIQPVTQKNVNPAPFEKGLELHIFEHIYKTVEAIGKKIELIFAEEEHQKN
HNLAILVREKSQGKFINDNLQYLQENYGINVTLIDENSTASELPQEILQLLQFIDRPHSP
EYFHNALQILHKRELIDIPITSININNPEKFLYPTILEENEYSDNAFHTRKVVIELLQAK
TELVHYQLIPYLAMALRYNQGELATTHKLSERIDRQIIGRSSLKTIISSLQELINSERFE
VIETFEDDDDNPENIYTRCGQVTIMTMHKSKGLDWDYVFLPFINENNIPGSSYVPKNVQF
LGEFNLPEVARGQLRYLIHQEKLADKITQYLSIDEAWEEAKKLKEYEEYRLLYVAMTRAK
RLLWMATEKKAPYIWSFFQDNQDIDSLSSMSPCPVFNFFKNSKN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaccattagaaaacttaatcaaacagctacgcccagggcaagatattttgggg
cgttggcaacaaggagaaatggcggtttcggcagtaccgggtgctggaaaatcccacagt
ttggcggtggcggcggcggcaaccattgccagagaaaaacttaacctacgtcgtcaatta
attattgttacctatacccgttctgctactgctagtattaaacaaaaagtagaaaagaat
ttggcttatttgggtttgccccccattggtttttcggtacaaactatccacggcttggcg
ttaaatattgccagtcaatatcctgagttatcccaactaaatttgaaccagagtaattta
gtttctcccaatagtaatcaccgtttgattaaacacactgtaaatcagtggattgatgaa
aatccccatctttttgaggttttggtggaaggaagacagggttttgggggggaagagtcg
gaaaaaatgcgccgagaaagcattatccgcagtgaattgttgcctaatttggctcgtacg
gtgattaaagaggcaaaatgttctggtaaaactccccaaagtcttgcccattatattgat
tatacccgtgatgattaccaaataatggcgatcgcctctggactatataaaaactatcaa
aatctaatgatcgaaaataactttatcgattatgacgatatgatattaggggcactgaaa
gtattacaaaacaacgaagcaaggaaaatatggcaacaacaaatccatgccgtatttgaa
gacgaagcccaagattctagccctctacaggttgaattactagaaattcttgccaaagac
gacgaaaaaccccacctagaggcaaatctagtcagagtcggagatccaaaccaagctata
aactccacctttacccctgctgaccccgtttattttaactggttttgtaacctttgttcc
caaaaaaattgtcttgccaccatcgcccaagcaggaagaagtacccaagttattatcgat
acagcaaatcaaacccttgattttgttaatcatcaagccctaaaaaaatctaaaaataac
gataaaatacatctgccatttagacagcaatatattcaacctgtaactcaaaaaaatgtc
aatcctgctccattcgagaaaggattagaactacatatatttgaacatatttacaaaaca
gtagaggctattggtaaaaaaattgaacttattttcgcagaagaagaacatcaaaaaaat
cataatttagctatattagttagggaaaaaagtcaaggtaaatttatcaatgataatctc
caatatctccaagaaaattacggcattaatgtaaccttaattgatgaaaatagcaccgcc
tcggaattaccccaagaaattttacagctactacaatttatagaccgcccccattccccc
gaatacttccataatgccttacaaatcctccacaaaagagaactaatagatattcccatc
acctccattaatattaataatccagaaaaatttttatatcccacaatattagaagaaaat
gaatattctgataatgcttttcacactagaaaagtggtcatcgaattattacaagccaaa
acagaattagtacactatcaactaataccctatcttgccatggcacttcgttataaccaa
ggagaactggccaccacccataaactaagtgaaagaatagatagacaaattattggacgt
agttccttaaaaaccattattagctcccttcaagaattaattaattccgaaagatttgaa
gtaatagaaacctttgaagatgatgacgataatcccgaaaatatttatacccgatgcgga
caagttactatcatgacaatgcacaaatccaagggtttagattgggattatgttttcttg
ccgtttattaatgaaaataatatccccggtagttcttatgtaccgaaaaatgtgcaattt
ttaggagaatttaacttgccagaagtcgccagaggacagttaagatatttaattcatcaa
gaaaaattagccgataaaattactcaatatttatccatcgatgaggcatgggaagaggca
aaaaaactgaaggaatatgaagaatatcgtctcttatatgttgcgatgacgagggcaaaa
agactgctttggatggcaaccgaaaaaaaagccccctatatatggtcattttttcaagat
aatcaagatatagatagtttaagtagtatgtcaccttgtccagtttttaatttttttaaa
aactcaaaaaattaa
DBGET
integrated database retrieval system
