Cyanobacterium stanieri: Cyast_2572
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Entry
Cyast_2572 CDS
T02377
Name
(GenBank) DNA-directed RNA polymerase gamma chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
csn
Cyanobacterium stanieri
Pathway
csn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cyast_2572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csn03021
]
Cyast_2572
03400 DNA repair and recombination proteins [BR:
csn03400
]
Cyast_2572
Enzymes [BR:
csn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cyast_2572
Transcription machinery [BR:
csn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cyast_2572
DNA repair and recombination proteins [BR:
csn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cyast_2572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AFZ48515
UniProt:
K9YQ36
LinkDB
All DBs
Position
2825082..2826968
Genome browser
AA seq
628 aa
AA seq
DB search
MTKQQTRQFDYVKIGIASPERIREWGERTLPNGIVVGEVTTPETINYRTLKPEMDGLFCE
KIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYLKLAAPVTHVWYLKG
IPSYLSILLDMPLRDVEQVVYFNSYVVLNPGNATNLSYRQLLSEDQWMEIEEQIYAEDSE
LEGIEVGIGAEAVERLLQEIELEEEADKLREEISNSKGQKRAKLIKRLRLIDNFIATGSK
PEWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLQEILAPEIIIR
NEKRMLQEAVDALIDNGRRGRTVVGGNNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPNLQIYQCGLPREMAIELFQPFVINRLIRIGIVSNIKAAKKLIIKGDPSIWKVLE
EVITGHPVLLNRAPTLHRLGIQAFEPVLVEGRAIQLHPLVCPPFNADFDGDQMAVHVPLS
IEAQAEARLLMMACHNILSPATGKPIIAPSQDMVLGCYYLTAENPAATKGAGSYFANLED
ALKAYEQDLVDLHAYVWVRFDGGVDGSHPNDEPEKVEELSDGSVWKYYSDRKVRETAEGE
QIAQYIHTTPGRIIYNKTIIDALDFEAV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcaacaaacaagacagtttgactacgtaaaaatcggcatcgcctccccagaa
agaatcagagaatggggcgagcgcaccttacccaatggtattgtcgtcggtgaagtcaca
actccagagactattaattatcgtaccctcaagcccgaaatggatgggctattttgtgag
aaaatttttggtccttccaaggattgggaatgtcactgcggaaaatacaaaagagtacgt
cataggggcattgtctgcgaacgttgtggggttgaggtgacagagtctagggtgcgccgt
catcgtatgggctaccttaaattggccgctcctgttacccatgtttggtacttaaaaggg
attcctagttatttgagtattctcctcgatatgccccttcgggatgtggagcaggtagta
tatttcaactcctatgtggtactcaaccccggtaacgccaccaacctaagctatcgtcaa
ttgctcagtgaagatcaatggatggaaattgaagagcaaatttatgccgaagattccgag
ttagaaggtatcgaggtaggcattggtgccgaagccgtagagcgtttattacaagaaatt
gagctagaagaagaagctgataaattaagggaagaaatcagcaatagtaaaggacaaaaa
agagcaaaactcattaaaagattacgcttaattgataactttattgccacaggttcaaaa
cctgaatggatggttttaagtgtaattcccgtcattcctcctgatttacgccccatggtg
cagttagatggtggtcgttttgctacctctgatttaaatgatttataccgtcgtgtaatc
aaccgtaataaccgtttaaaacgcttacaggaaattctcgcccccgaaatcattatccgt
aatgaaaaacggatgttacaagaggcggtggatgctctgattgataatggtaggagaggg
cgtactgtggtaggtggtaataatcgccccctcaaatccctttctgatattatcgaaggt
aaacagggtcgtttccgtcaaaaccttttgggtaaacgggttgactactcaggacgttcg
gtaattgtggtcgggcctaatttacaaatttatcagtgcggtttgcctagggaaatggcg
atcgaacttttccaaccttttgttattaaccgtcttatccgtatcggtattgtcagcaac
atcaaggcagccaaaaaattaatcattaaaggtgatcccagtatctggaaagtattggag
gaagtaattacaggacaccccgtattactcaaccgtgcgccgactctccaccgtttaggt
atccaagcctttgaacctgtgttggtggaaggacgagccattcaacttcatccccttgta
tgtcctccctttaacgctgactttgacggtgaccaaatggcggtacacgtacccctatcc
attgaagcccaagcagaagcccgtttgttgatgatggcttgtcataatatcctttctcct
gccacaggtaagccgattattgccccttctcaggatatggtattaggttgttattatctc
acggcagaaaaccctgccgccactaagggcgctggaagttatttcgctaaccttgaggat
gccctcaaggcttatgaacaagatttagtagatttacacgcctatgtgtgggtgcgtttt
gatgggggtgtggatggtagtcatcccaatgatgaacctgaaaaagtggaagaattgtcc
gatggtagtgtttggaagtattatagcgatcgcaaggtacgcgaaaccgcagagggtgaa
caaatcgcccaatatatccataccaccccaggacggattatttacaacaaaaccatcatt
gacgctttagattttgaagctgtctaa
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