Clostridium cf. saccharolyticum K10: CLS_05970
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Entry
CLS_05970 CDS
T02614
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cso
Clostridium cf. saccharolyticum K10
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cso03032
]
CLS_05970
03400 DNA repair and recombination proteins [BR:
cso03400
]
CLS_05970
Enzymes [BR:
cso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CLS_05970
DNA replication proteins [BR:
cso03032
]
Prokaryotic type
DNA Topoisomerases
CLS_05970
DNA repair and recombination proteins [BR:
cso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLS_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
CBK76390
LinkDB
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Position
591743..594310
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AA seq
855 aa
AA seq
DB search
MEPNIFDKVHDIDLKKTMEKSYIDYAMSVIAARALPDVRDGLKPVQRRVLYSMIELNNGP
DKPHRKCARIVGDTMGKYHPHGDSSIYGALVNMAQKWSTRYMLVDGHGNFGSVDGDGAAA
MRYTEARLSRISMEMLADINKNTVDFVPNFDETEREPVVLPSRFPNLLANGTSGIAVGMA
TNIPPHNLRELIAAVVKIIDNQIEEGRDTSIEELMEIVKGPDFPTGATILGKAGIEEAYR
TGKGKIRVRAVTDIETMPNGKSRIIVTEIPYLVNKARLIEKIAELVKDKRVDGITDLRDE
SNREGMRICIELRRDVNANIVLNQLLKHTQLQDTFGVNMLALVNNEPKVLNLHQMLTYYL
DHQKDVVTRRTKYDLNKAEERAHILEGLLKALDYIDEVIRIIRGSKTVAEAKATLMERFE
LSDAQAQAIVDMRLRALTGLEREKLLNEYQELEKRIAELRGILADENKLLTVIKEEIQLI
SDKYGDDRRTKIGYDEFDMSAEDLIPDEDVVVAITNLGYIKRMSSDNFKSQNRGGKGIKG
MQTIDEDYIEELLMTTTHHYMMFFTNTGRVYRLKAYEIPEAGRTARGTAIVNLIQLQPGE
KITATVPMKEFDEDKFLFMATKNGMVKRTPMKEYENVRKNGLQAIVLREDDELIEVKATD
NTEDIFLVTKKGMCIRFHETDVRITGRVSMGVIGMKFDSDDEIIGMQMASQGECLLVVSE
YGLGKRTPIEEFTSQLRGGKGVRCYRITEKTGYLVGAKLVDEGRQIMLITNEGIIIKMRV
NTISIIGRNTSGVKLMDIDPESGVVVASIAKVRESSQDEDEELEDGFLEDGDGSEDDREG
EEKSLREEDEETDSE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaatatttttgacaaagtccatgacatagacctgaaaaagaccatggaaaag
tcctacatcgactacgctatgagcgtaatcgctgccagggctctgccggatgtgcgcgac
ggcttaaagccggttcagaggcgtgtgctctactccatgatcgagttaaacaacggccct
gacaagcctcacagaaaatgcgcccgtatcgtcggcgataccatgggtaaataccacccc
cacggagacagctccatctatggagcactcgtaaatatggctcagaagtggtctacccgc
tatatgctggtagacggccacggaaatttcggctccgtagacggggacggcgctgcagcc
atgcgatatacagaggcaaggctgagccggatttccatggaaatgctggcggatatcaac
aagaacaccgtcgactttgtgccaaacttcgatgagacagagagggagccggtggtgctg
ccatcccgcttcccaaatcttctggcaaacggaacttccggaattgcagtcggcatggcg
accaatatcccgccccacaacctgcgggagctgattgcggcggttgtcaagatcattgac
aaccagatcgaggagggaagagatacctccatcgaggagcttatggagattgtaaagggg
ccggacttccctacaggggccaccattctcggaaaagcaggaatcgaggaggcctaccgc
acaggaaagggaaagatccgtgtccgggcagtcaccgacattgagaccatgccaaacggc
aagagccggattatcgtcacagagattccgtatctggtcaacaaggcccgcctcatcgaa
aagattgcggagcttgtgaaggacaagagggtggacggaatcacagacctgagggatgag
tcaaaccgcgagggaatgcgcatctgcatcgagcttcgccgggatgtgaatgccaatatc
gtcctgaaccagctcttaaagcatacgcagcttcaggataccttcggcgtcaatatgctg
gccctggtgaacaatgagccgaaggtgctgaatctgcaccagatgctcacctactatctg
gatcaccagaaggatgtggtcaccagaaggacaaagtacgacttaaacaaggccgaggag
agggcccacattttagagggacttttaaaggctctcgactatattgacgaggtgatccga
atcatccgcggttccaagacagtggctgaggcaaaagccactctgatggagcggtttgaa
ctctcagacgcccaggcccaggcgattgtggatatgaggcttcgcgccctgaccggtttg
gagagggagaagctgttaaatgagtaccaggagcttgagaagcgcattgcagagctgcgc
gggatcctggcagacgagaacaagctcttaacagtcatcaaggaggagatacagctgatc
tccgacaagtacggagatgacagaaggacgaagatcggctatgacgagttcgatatgtct
gccgaggatctgattccggatgaggatgtggtggtggccatcaccaacttaggctatatt
aagcgcatgtccagtgacaattttaagagccagaaccggggcggcaagggaatcaaggga
atgcagaccatcgacgaggactacattgaagagctcctgatgaccacgacccaccactac
atgatgttcttcacgaacaccggccgcgtttaccgcctgaaggcctacgagatcccggag
gcgggaaggaccgccaggggaacggccatcgtaaacctgatccagcttcagccgggagaa
aagatcacggccacagttcccatgaaggagtttgacgaggacaagttcctgttcatggcc
acgaaaaacggcatggtgaagcgcacgcccatgaaagagtatgagaacgtcagaaagaac
ggactccaggccattgtgctcagggaggatgatgaactcatcgaggtaaaggccacggac
aacacagaggacatcttccttgtgacaaagaagggcatgtgcatccggttccatgagacg
gatgtgcgtatcaccggccgtgtttccatgggtgtcatcggcatgaagtttgactctgat
gatgagattatcggaatgcagatggccagccagggcgaatgcctgctggtggtttcagaa
tacggccttggaaagaggactccgattgaagaattcaccagccagttaagaggcggcaag
ggcgtcagatgctaccggattacggagaagacaggatacctggtaggagccaagctggtg
gacgagggacgccagattatgctgatcaccaatgagggaatcattatcaagatgagggtg
aacacaatctccattatcggaagaaacacttcgggagtaaagctgatggatatcgatccg
gagtccggcgtggtggtagccagcattgccaaggtgagagagagcagccaggatgaggac
gaggagttagaggacggctttttagaggatggagacggcagtgaggacgaccgggaggga
gaagaaaaatctctccgggaagaggatgaggagacagactctgaataa
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