Clostridium cf. saccharolyticum K10: CLS_08700
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Entry
CLS_08700 CDS
T02614
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cso
Clostridium cf. saccharolyticum K10
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cso03016
]
CLS_08700
Enzymes [BR:
cso01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLS_08700
Transfer RNA biogenesis [BR:
cso03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLS_08700
Prokaryotic type
CLS_08700
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA_3
DUF6210
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CBK76600
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All DBs
Position
841159..842085
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AA seq
308 aa
AA seq
DB search
MYHGVINIYKEQGYTSHDVVAKLRGILKQKKIGHTGTLDPAAEGVLPVCLGRGTRLCDML
TDRSKTYQTVMLLGAVTDTQDTTGTILNENRGMAETLDEEKIRDIAEGFVGPYSQIPPMY
SALKVNGKKLYELAREGKEIERKARPVEIFSLTVDRIELPRVTMTVHCSKGTYIRTLCHD
IGEKLGCGGCMEYLLRTQVDRFLLKDSLKLSEVEALVREGRIEDAVIPVDQMFSGLPEIV
SESGTLDRLLANGNFFAENQAGRGSAVSGAEDGSLCRVYDSRRRFIGVYEYRAREKRWKP
KKIFLGGE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatggagtgataaatatttacaaggagcagggctacacctcccacgacgtggtg
gcaaagctcaggggaattttaaagcagaaaaaaatcggccacacagggactctggacccg
gcggcggagggagttctcccggtctgcctgggacggggaaccagactgtgcgacatgctg
acggaccggagcaaaacataccagacggtgatgcttctgggcgctgtcacggatacccag
gataccacaggaaccatcctgaatgaaaaccgcgggatggctgagacgctggacgaggag
aaaatcagagacattgcggaagggtttgtgggaccctacagccagatcccgcccatgtat
tctgccctcaaggtaaacggcaaaaagctctacgagcttgccagggagggaaaggagatt
gagcgaaaggcgcgcccggtggaaattttcagcctgactgttgaccggatcgagcttccg
agagtgaccatgacggttcactgttccaagggaacctatatccgaaccctctgccatgat
ataggggaaaaactgggctgcggcggctgcatggagtaccttctgagaactcaggtggat
cggttccttctgaaggacagcctgaagctctctgaagttgaggctcttgtaagggaaggc
aggatagaggacgcggttatcccggtggatcagatgttttccgggcttcccgagattgtc
tctgagagcgggactcttgaccgtcttctggccaacggaaacttctttgcagagaatcag
gcgggaaggggttcggcagtctcaggcgcagaggacggcagtctctgccgcgtctatgac
agcaggcgccgctttatcggcgtttatgagtaccgggcccgtgagaagcggtggaagcca
aaaaagatttttctgggaggagaatag
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