Clostridium cf. saccharolyticum K10: CLS_11040
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Entry
CLS_11040 CDS
T02614
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLS_11040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cso03400
]
CLS_11040
Enzymes [BR:
cso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CLS_11040
DNA repair and recombination proteins [BR:
cso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLS_11040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
PPARgamma_N
Motif
Other DBs
NCBI-ProteinID:
CBK76791
LinkDB
All DBs
Position
complement(1069969..1070895)
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AA seq
308 aa
AA seq
DB search
MVHRIQKKISYMDLRQIADSGQSFRMAKLQDRRFSVISGEHYLEIVQGPGEDHAAERSFT
FCCDEEELHFWEHYFDLEHDYGVYINSVRKRDSYLSQAARAGSGIRILNQDPWEMVITFV
ISQQKTIPKIREAVEALSRNYGTRHETVVNDDEGEHTVVWYSFPTPAQLSAASETELREL
KLGYRAKYIFRLCQDAVEGRLDLELLQRLSYGEAMTYLGSFYGIGTKVANCICLFGLHHI
EAFPVDTWIEQILMAEYYRKRKKKYDSLPKSKLYQEMIADHFGMYKGYAGVMQQYIFYYE
RVRRGKVR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggttcatagaatacaaaagaaaatttcttatatggatttgagacagatcgccgattcc
ggccagtccttccgcatggcgaagctgcaggacaggcgtttttctgttataagcggggag
cattacctggagattgttcagggaccgggcgaggaccatgcagcagaacggtctttcacc
ttttgctgtgatgaggaagagctgcacttctgggaacactactttgatctggaacacgat
tatggggtttacataaattccgtcagaaagagagactcctatctgtcgcaggcagcccgg
gccggaagcggcataagaattctgaatcaggatccctgggagatggttatcacctttgtc
atctcacagcagaaaaccatcccaaagatcagggaggcagtggaagctttaagcagaaac
tatgggacgcggcatgaaacagtggtaaacgatgacgaaggggagcataccgtcgtctgg
tacagcttcccgaccccggcgcagctctcagcggcatcggagacagaactgcgggaactg
aagctggggtaccgggccaagtatatttttcgcctctgccaggatgctgtggaggggcgg
ctggatttggaactgctccagaggctgagctacggcgaggccatgacctatcttggcagc
ttttacggaatcggaacaaaggttgccaactgtatctgcctgttcggccttcaccatatc
gaggcctttcccgtggacacctggatcgagcagatcctgatggcggaatattacaggaaa
cggaagaaaaaatatgactcccttccaaagtccaagctgtatcaggaaatgattgccgat
cactttggcatgtacaaggggtatgcgggggttatgcagcagtatatattctattatgag
agggtgaggagagggaaggtgaggtag
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